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LOCUS EU618070 864 bp RNA linear VRL 29-JAN-2009
DEFINITION HIV-1 isolate 1129 from Cameroon pol protein (pol) gene, partial
cds
ACCESSION EU618070
VERSION EU618070.1 GI:194273718
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 864)
Show all sequences for reference 1
AUTHORS Brennan,C.A., Bodelle,P., Coffey,R., Devare,S.G., Golden,A.,
Hackett,J.J., Harris,B., Holzmayer,V., Luk,K.-C., Schochetman,G.,
Swanson,P., Yamaguchi,J., Vallari,A., Ndembi,N., Ngansop,C.,
Makamche,F., Mbanya,D., Gurtler,L.G., Zekeng,L. and Kaptue,L.
TITLE The prevalence of diverse HIV-1 strains was stable in Cameroonian
blood donors from 1996 to 2004.
JOURNAL J. Acquir. Immune Defic. Syndr.. 49(4); 432-9 (2008)
PUBMED 18931623
REFERENCE 2 (bases 1 to 864)
Show all sequences for reference 2
AUTHORS Brennan,C.
TITLE Direct Submission
JOURNAL Submitted (03-APR-2008) 09NG, Abbott Diagnostics, 100 Abbott Park
Rd, Abbott Park, IL 60064-6015, USA
COMMENT Subtype assigned by HIV database using RIP [JM 1/11].
FEATURES Location/Qualifiers
source 1..864
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="1129"
/isolation_source="plasma"
/db_xref="taxon:11676"
/country="Cameroon"
/note="collected in 2003-2004"
gene <1..>864
/gene="pol"
CDS <1..>864
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ACF37529.1"
/db_xref="GI:194273719"
/translation="FLDGIDKAQEDHERYHSNWRTMASDFNLPPIVAKEIVACCDKCQ
LKGEAIHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVITAETGQETAYFIL
KLAGRWPVKVIHTDNGSNFTSGAVKAACWWAGIQQEFGIPYNPQSQGVVESMNKELKK
IIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQIT
KIQNFRVYYRDSRDPVWKGPAKLLWKGEGAVVIKDNSDIKVVPRRKAKIIRDYGKQMA
GDDCVAGRQDED"
BASE COUNT 340 a 128 c 217 g 179 t
ORIGIN
1 tttttagatg ggatagataa ggctcaagag gaccatgaaa gatatcacag caattggagg
61 acaatggcta gtgattttaa tctgccacct atagtagcaa aggaaatagt ggcctgctgc
121 gataaatgtc aactaaaagg ggaagccata catggacaag tagactgtag tccagggata
181 tggcaattag attgcacaca tctagaagga aaagtaatcc tggtagcagt ccatgtggct
241 agtggctata tagaagcaga agttatcaca gcagaaacag gacaggagac agcatacttt
301 atactaaaat tagcaggaag gtggccagta aaagtaatac acacagataa tggcagcaat
361 ttcaccagtg gtgcagttaa agcagcttgt tggtgggcag gtatccaaca ggaatttgga
421 atcccctaca atccccaaag tcaaggagta gtggaatcta tgaataaaga attaaagaaa
481 atcatagggc aagtaagaga gcaagctgaa caccttaaaa cagcagtaca aatggcagta
541 ttcattcaca attttaaaag aaaagggggg attggggggt acagtgcagg ggaaagaata
601 atagacataa tagcaacaga catacaaact aaagaattac aaaaacaaat tacaaaaatt
661 caaaattttc gggtttatta cagagacagc agagacccag tgtggaaagg accagcaaaa
721 ctactctgga aaggtgaagg ggcagtagta ataaaggaca atagtgatat aaaagtagta
781 ccaagaagaa aagcaaagat cattagggat tatggaaaac agatggcagg tgatgattgt
841 gtggcaggta gacaggatga ggat
//
last modified: Tue May 31 10:56 2022