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LOCUS	    EU346275		    1092 bp    RNA     linear	VRL 31-DEC-2008
DEFINITION  HIV-1 isolate 440283_0_p2_3 from USA pol protein (pol) gene,
	    partial cds
ACCESSION   EU346275
VERSION     EU346275.1 GI:169635312
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1092)
            Show all sequences for reference 1
  AUTHORS   Agwu,A., Lindsey,J.C., Ferguson,K., Zhang,H., Spector,S.,
	    Rudy,B.J., Ray,S.C., Douglas,S.D., Flynn,P.M. and Persaud,D.
  TITLE     Analyses of HIV-1 drug-resistance profiles among infected
	    adolescents experiencing delayed antiretroviral treatment switch
	    after initial nonsuppressive highly active antiretroviral therapy.
  JOURNAL   AIDS Patient. Care. STDS.. 22(7); 545-52 (2008)
  PUBMED    18479228
REFERENCE   2 (bases 1 to 1092)
            Show all sequences for reference 2
  AUTHORS   Agwu,A., Lindsey,J., Ferguson,K., Zhang,H., Spector,S., Rudy,B.,
	    Ray,S.C., Douglas,S., Flynn,P. and Persaud,D.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-DEC-2007) Pediatrics, Infectious Diseases, Johns
	    Hopkins University School of Medicine, 600 N. Wolfe Street, Park
	    256, Baltimore, MD 21287, USA
FEATURES             Location/Qualifiers
     source	     1..1092
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="440283_0_p2_3"
		     /isolation_source="subject 440283 plasma drawn at 0 weeks"
		     /db_xref="taxon:11676"
		     /clone="p2_3"
		     /country="USA"
		     /note="PACTG trial 381"
     gene	     <1..>1092
		     /gene="pol"
     CDS	     <1..>1092
		     /gene="pol"
		     /note="contains PR and RT regions"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACA58428.1"
		     /db_xref="GI:169635313"
		     /translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEMDLPGRWKP
		     KMIGGIGGFIKVRQYDQIAIEICGHKVIGTVLIGPTPVNIIGRNLMTQLGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIF
		     AIRKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKQKKSVTVLDVGDAYFSVP
		     LDKEFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     LVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIVLPEKDNWTVNDIQKLVGKLN"
BASE COUNT	423 a	 184 c	  231 g    254 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gtcacagtaa agataggggg gcaactgaag 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgga tctgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acaatatgat 
     181 cagatagcca tagaaatctg tggacataaa gttataggta cagtattaat aggacctaca 
     241 cccgtcaaca taattggaag aaatctaatg actcagctag gttgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattgg tggaaatttg tacagaaatg 
     421 gaaaaggaag gaaagatttc aaagattggg cctgaaaatc cctacaatac tccaatattt 
     481 gccataagga aaaaagatag tactaaatgg agaaaattag tagatttcag agagcttaat 
     541 aagagaactc aagacttctg ggaagttcaa ctaggaatac cacatcccgc agggttaaaa 
     601 cagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcccttagac 
     661 aaagaattca gaaagtatac tgcatttacc atacctagta caaataatga gacaccaggg 
     721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcacccgc aatattccaa 
     781 agtagcatga caaaaatctt ggagcctttt agaaaacaaa atccagacct agttatctat 
     841 caatacatgg atgatctgta tgtaggatct gacttagaaa taggacagca tagaacaaaa 
     901 atagaggaac tgagacaaca tctgttgaag tgggggttta ccacaccaga caagaaacat 
     961 cagaaagaac ctccatttct ttggatgggc tatgagctcc atcctgataa atggacagta 
    1021 cagcctatag tgctgccaga aaaagacaac tggactgtca atgacataca gaagttagtg 
    1081 ggaaaattga at
//
last modified: Tue May 31 10:56 2022


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