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LOCUS EU342866 378 bp DNA linear VRL 30-APR-2008
DEFINITION HIV-1 isolate 07SP55-371139 from Spain envelope glycoprotein (env)
gene, partial cds
ACCESSION EU342866
VERSION EU342866.1 GI:182411282
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 378)
Show all sequences for reference 1
AUTHORS Holguin,A., De Mulder,M. and Yebra,G.
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2007) HIV-1 Molecular Epidemiology Group,
Infectious Diseases Department, Hospital Carlos III, Sinesio
Delgado Street 10, Madrid 28029, Spain
REFERENCE 2
Show all sequences for reference 2
AUTHORS Holguin,A., De Mulder,M., Yebra,G., Lopez,M. and Soriano,V.
TITLE Increase of non-B subtypes and recombinants among newly diagnosed
HIV-1 native Spaniards and immigrants in Spain.
JOURNAL Curr. HIV. Res.. 6(4); 327-34 (2008)
PUBMED 18691031
REFERENCE 3
Show all sequences for reference 3
AUTHORS Yebra,G., Rivas,P., Herrero,M.D., Lopez,M., De Mulder,M.,
Puente,S., Ramirez-Olivencia,G., Soriano,V. and Holguin,A.
TITLE Clinical differences and viral diversity between newly HIV type
1-diagnosed African and non-African patients in Spain (2005-2007).
JOURNAL AIDS Res. Hum. Retroviruses. 25(1); 37-44 (2009)
PUBMED 19182919
FEATURES Location/Qualifiers
source 1..378
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="07SP55-371139"
/isolation_source="plasma of subject coming from
Equatorial Guinea and residing in Spain"
/db_xref="taxon:11676"
/country="Spain"
/note="subtype: recombinant CRF02_AG"
gene <1..>378
/gene="env"
CDS <1..>378
/gene="env"
/note="gp41"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ACB88550.1"
/db_xref="GI:182411283"
/translation="SGIVQQQSNLLQAIEAQQHMLRLTVWGIKQLQARVLALERYLXD
QQLLGIWGCSGKLICTTTVPWNSSWSNRTXEAIWDNMTWLQWDKEIGNYTSLIYTLIE
ESQNQQEKNEQDLLELDKWAXLWN"
BASE COUNT 117 a 76 c 93 g 83 t 9 other
ORIGIN
1 tctggtatag tgcaacagca gagcaatctg ctgcaagcta ttgaggckca acagcatatg
61 ttgmgactca cagtctgggg catyaaacag ctccaggcaa gagtcctggc tctggaaaga
121 tacctaagkg atcaacagct cctrggaatt tggggttgct ctggaaaact catctgcacc
181 actactgtgc cctggaactc tagctggagt aatagaacty ttgaagcaat ttgggataac
241 atgacctggc tgcartggga taaagagatt ggcaattaca caagcttaat atacacccta
301 attgaagaat cgcagaacca gcaggaaaag aatgarcaag acttgttgga attggacaag
361 tgggcaarcc tgtggaat
//
last modified: Tue May 31 10:56 2022