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LOCUS	    EU342811		    2445 bp    DNA     linear	VRL 30-APR-2008
DEFINITION  HIV-1 isolate 07SP54-371139 from Spain gag protein (gag) gene,
	    complete cds; and pol protein (pol) gene, partial cds
ACCESSION   EU342811
VERSION     EU342811.1 GI:183206836
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2445)
            Show all sequences for reference 1
  AUTHORS   Holguin,A., De Mulder,M. and Yebra,G.
  TITLE     Direct Submission
  JOURNAL   Submitted (07-DEC-2007) HIV-1 Molecular epidemiology group.
	    Infectious Diseases Department, Hospital Carlos III, Sinesio
	    Delgado Street 10, Madrid 28029, Spain
REFERENCE   2
            Show all sequences for reference 2
  AUTHORS   Holguin,A., De Mulder,M., Yebra,G., Lopez,M. and Soriano,V.
  TITLE     Increase of non-B subtypes and recombinants among newly diagnosed
	    HIV-1 native Spaniards and immigrants in Spain.
  JOURNAL   Curr. HIV. Res.. 6(4); 327-34 (2008)
  PUBMED    18691031
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Yebra,G., Rivas,P., Herrero,M.D., Lopez,M., De Mulder,M.,
	    Puente,S., Ramirez-Olivencia,G., Soriano,V. and Holguin,A.
  TITLE     Clinical differences and viral diversity between newly HIV type
	    1-diagnosed African and non-African patients in Spain (2005-2007).
  JOURNAL   AIDS Res. Hum. Retroviruses. 25(1); 37-44 (2009)
  PUBMED    19182919
FEATURES             Location/Qualifiers
     source	     1..2445
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="07SP54-371139"
		     /isolation_source="plasma of subject coming from
		     Equatorial Guinea and residing in Spain"
		     /db_xref="taxon:11676"
		     /country="Spain"
		     /note="subtype: recombinant CRF02_AG"
     gene	     1..1506
		     /gene="gag"
     CDS	     1..1506
		     /gene="gag"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="ACC54582.1"
		     /db_xref="GI:183206837"
		     /translation="MGARASVLSGGKLDAWEKIRLRPGGKKQYRLKHIVWASRELDRF
		     ALNPGLLETAEGCQQLIEQLQSTLKTGSEEIRSLYNTIATLWCVHQRIEIKDTKEALD
		     KIEEMQNKSKQKTQQAAAATGSSSQNYPIVQNAQGQMTHQSMSPRTLNAWVKVIEEKA
		     FSPKVIPMFTALSEGATPQDLNLMLNIVGGHQAAMQMLKDTINEEAAEWDRQHPVHAG
		     PIPPGQMREPRGSDIAGTTSTLQEQIGWMTSNPPVPVGEIYKRWIVLGLNKIVRMYSP
		     VSILDIRQGPKEPFRDYVDRFFKVLRAEQGTQEVKNWMTETLMVQNANPDCKSILRAL
		     GPGATLEEMMTACQGVGGPSHKARVLAEAMSQAQQPHVMIQRGNFRGQRTLKCFNCGK
		     EGHLARNCKAPRKGCWKCGKEHQMKDCTERQANFLGKIWPSNKGRPGNFPQSRPEPTA
		     PPAESVGMPTAPPAESVGMGEEIASSPRQEPRDKELYPPLTSLKSLFGNDP"
     gene	     <1275..>2445
		     /gene="pol"
     CDS	     <1275..>2445
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ACC54583.1"
		     /db_xref="GI:183206838"
		     /translation="FFRENLAFQQGEARKFSSEQTRANSPTSRECGDANSPTSRECGD
		     GGRDSLLPAARTEGQGAIPSLNFPQITLWQRPLVTVRIGGQLIEALLDTGADDTVLEE
		     INLPGKWKPKMIGGIGGFIKVRQYDQILLEICGKKAIGTVLVGETPVNIIGRNMLTQI
		     GCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICADMEKEGKISKIGP
		     ENPYNTPVFAIKKKDSTKWRKVVDFRELNKRTQDFWEVQLGIPHPAGLEKKKSITVLD
		     VGDAYFSVPLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKIL
		     EPFRTRNPDIVIYQYVDDLYVSSDLEIEQHRAKIEELREHLLKWGLTTPDKKHQKE"
BASE COUNT	922 a	 435 c	  584 g    503 t      1 other
ORIGIN
       1 atgggtgcga gagcgtcagt gttaagtggg ggaaaattag atgcgtggga gaaaattcgg 
      61 ctaaggccag ggggaaagaa acaatataga ctaaaacata tagtatgggc aagcagggag 
     121 ttggacagat tcgcactcaa ccctggcctt ttagaaacag cagaagggtg tcagcaatta 
     181 atagagcagt tacaatcaac tctcaagaca ggatcagaag aaattagatc attatataat 
     241 acaatagcaa ccctttggtg cgtgcatcaa aggatagaaa taaaagacac caaggaagcc 
     301 ttagataaaa tagaggaaat gcaaaataag agcaagcaaa agacacagca ggcagccgct 
     361 gccacaggaa gcagtagcca gaattaccct atagtgcaaa atgcacaagg gcaaatgaca 
     421 catcagtcca tgtcacctag gactttaaat gcatgggtga aggtaataga agaaaaggct 
     481 ttcagcccaa aagtaatacc catgtttaca gcattatcag aaggrgccac cccacaagat 
     541 ttaaatctga tgctaaacat agtgggggga caccaggcag caatgcagat gttaaaagat 
     601 accatcaatg aggaagctgc agaatgggac aggcaacatc cagtacatgc agggcctatt 
     661 ccaccaggcc agatgaggga accaagggga agtgacatag caggaactac tagtaccctt 
     721 caagaacaaa tagggtggat gacaagcaat ccacctgtcc cagtgggaga aatctataaa 
     781 agatggatag tcctgggatt aaataaaata gtaagaatgt atagccctgt cagcattttg 
     841 gacataagac aagggccaaa agaacccttt agagattatg tagataggtt ctttaaagtt 
     901 ttgagagctg aacaaggtac acaggaggta aagaactgga tgacagaaac cttgatggtc 
     961 caaaatgcga atccagactg taagtccatt ttaagagcat taggaccagg ggctacctta 
    1021 gaagaaatga tgacagcatg tcagggagtg ggagggccta gccacaaagc aagggttttg 
    1081 gctgaggcaa tgagtcaagc acagcagccc cacgtaatga tacagagagg caattttagg 
    1141 ggccagagaa cattaaagtg tttcaactgt ggcaaagaag gacacctagc cagaaattgc 
    1201 aaggccccta ggaaaggctg ttggaaatgt ggaaaggagc accaaatgaa agactgtact 
    1261 gaaagacagg ctaatttttt agggaaaatc tggccttcca acaaggggag gccaggaaat 
    1321 tttcctcaga gcagaccaga gccaacagcc ccaccagcag agagtgtggg gatgccaaca 
    1381 gccccaccag cagagagtgt ggggatgggg gaagagatag cctcctcccc gcggcaagaa 
    1441 ccgagggaca aggagctata ccctccctta acttccctca aatcactctt tggcaacgac 
    1501 ccttagtcac agtaagaata gggggacagc taatagaagc tctattagac acaggagcag 
    1561 atgatacagt attagaagaa ataaatttac caggaaaatg gaaaccaaaa atgatagggg 
    1621 gaattggagg ttttatcaaa gtaagacaat atgatcagat acttttagaa atttgtggaa 
    1681 aaaaggctat aggtacagta ttagtaggag agacacctgt caacataatt ggacgaaata 
    1741 tgttgactca gattggttgt actttaaatt ttccaattag tcctattgaa actgtaccag 
    1801 taaaattaaa gccaggaatg gatggcccaa aggttaaaca atggccattg acagaagaaa 
    1861 aaataaaagc attaacagaa atttgtgcag atatggaaaa ggaaggaaaa atttcaaaga 
    1921 ttgggcctga aaatccatac aatactccag tatttgccat aaagaaaaaa gatagtacta 
    1981 aatggagaaa agtagtagat ttcagagaac tcaataagag aactcaagac ttctgggagg 
    2041 tccagttagg aatacctcat cccgcaggat tagaaaagaa aaaatcaata acagtactag 
    2101 atgtagggga tgcatatttt tcagttccct tagataaaga ctttagaaag tatactgcat 
    2161 tcactatacc tagtataaat aatgagacac caggaattag atatcagtac aatgtgctac 
    2221 cacagggatg gaaaggatca ccagcaatat ttcaggcaag catgacaaaa atcttagagc 
    2281 cctttagaac aagaaatcca gatatagtga tctaccaata tgtggatgat ttatatgtaa 
    2341 gttctgactt agagatagaa cagcatagag caaaaataga ggagttgaga gaacatctac 
    2401 tgaaatgggg attaaccaca ccagacaaaa aacatcagaa agaac
//
last modified: Tue May 31 10:56 2022


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