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LOCUS EU068203 511 bp RNA linear VRL 22-SEP-2007
DEFINITION HIV-1 isolate 01AOCSE121 from Angola protease (pol) gene, partial
cds
ACCESSION EU068203
VERSION EU068203.1 GI:157280964
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 511)
Show all sequences for reference 1
AUTHORS Bartolo,I., Rocha,C., Bartolomeu,J., Gama,A., Marcelino,R.,
Fonseca,M., Mendes,A., Epalanga,M., Silva,P.C. and Taveira,N.
TITLE Highly divergent subtypes and new recombinant forms prevail in the
HIV/AIDS epidemic in Angola: New insights into the origins of the
AIDS pandemic.
JOURNAL Infect Genet Evol. 2008 May 9.
PUBMED 18562253
REFERENCE 2 (bases 1 to 511)
Show all sequences for reference 2
AUTHORS Bartolo,I., Rocha,C., Bartolomeu,J., Gama,A., Marcelino,R.,
Fonseca,M., Mendes,A., Epalanga,M. and Taveira,N.
TITLE Direct Submission
JOURNAL Submitted (26-JUL-2007) Microbiologia, Faculdade de Farmacia de
Lisboa, Avenida das Forcas Armadas, Lisboa 1649-019, Portugal
FEATURES Location/Qualifiers
source 1..511
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="01AOCSE121"
/db_xref="taxon:11676"
/country="Angola"
/note="genotype: D"
gene <1..>511
/gene="pol"
CDS <1..>511
/gene="pol"
/codon_start="3"
/transl_table="1"
/product="protease"
/protein_id="ABV29387.1"
/db_xref="GI:157280965"
/translation="EQARANSPTSRELRVWGGDNPRSETGAEGQGTISFNLPQITLWQ
RPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGKWKPKMIGGIGGFIKVRQYDQILIE
ICGHRAMGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQW
PLTEEKIKA"
BASE COUNT 186 a 98 c 117 g 110 t
ORIGIN
1 cagagcaggc cagagccaac agccccacca gcagagagct tcgggtttgg ggaggagaca
61 acccccgctc agaaacagga gcagaaggac aaggaactat atcctttaac ctccctcaaa
121 tcactctttg gcaacgaccc cttgtcacaa taaagatagg gggacagcta aaggaagctc
181 tattagatac aggagcagat gatacagtat tagaagaaat gaatttgcca ggaaaatgga
241 aaccaaaaat gataggggga attggaggtt ttatcaaagt aagacagtat gatcaaatac
301 tcatagaaat ttgtgggcat agggctatgg gtacagtatt agtaggacct acccctgtca
361 acataattgg aagaaatttg ttgacccaga ttggctgcac tttaaatttt cccattagtc
421 ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaaa gttaaacaat
481 ggccattgac agaagaaaaa ataaaagcat t
//
last modified: Tue May 31 10:56 2022