View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS EU068199 517 bp RNA linear VRL 22-SEP-2007
DEFINITION HIV-1 isolate 01AOCSE116 from Angola protease (pol) gene, partial
cds
ACCESSION EU068199
VERSION EU068199.1 GI:157280956
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 517)
Show all sequences for reference 1
AUTHORS Bartolo,I., Rocha,C., Bartolomeu,J., Gama,A., Marcelino,R.,
Fonseca,M., Mendes,A., Epalanga,M., Silva,P.C. and Taveira,N.
TITLE Highly divergent subtypes and new recombinant forms prevail in the
HIV/AIDS epidemic in Angola: New insights into the origins of the
AIDS pandemic.
JOURNAL Infect Genet Evol. 2008 May 9.
PUBMED 18562253
REFERENCE 2 (bases 1 to 517)
Show all sequences for reference 2
AUTHORS Bartolo,I., Rocha,C., Bartolomeu,J., Gama,A., Marcelino,R.,
Fonseca,M., Mendes,A., Epalanga,M. and Taveira,N.
TITLE Direct Submission
JOURNAL Submitted (26-JUL-2007) Microbiologia, Faculdade de Farmacia de
Lisboa, Avenida das Forcas Armadas, Lisboa 1649-019, Portugal
FEATURES Location/Qualifiers
source 1..517
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="01AOCSE116"
/db_xref="taxon:11676"
/country="Angola"
/note="genotype: F1"
gene <1..>517
/gene="pol"
CDS <1..>517
/gene="pol"
/codon_start="3"
/transl_table="1"
/product="protease"
/protein_id="ABV29383.1"
/db_xref="GI:157280957"
/translation="GQARANSPTSRRFGFSPDDSLSEAGAPGGGTGTVSSLNFPQITL
WQRPVVTVTVEGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVKQYDQIT
IDICGHKATGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVK
QWPLTEEKIKA"
BASE COUNT 182 a 103 c 118 g 114 t
ORIGIN
1 cagggcaggc cagagccaac agccccacca gcagacgctt tgggttcagt cccgacgact
61 ccctctccga agcaggagct ccaggaggag ggacagggac tgtatcctcc cttaacttcc
121 ctcaaatcac tctttggcaa cgaccagtag tcacagtaac agtagaggga cagctaaggg
181 aagctctatt agatacagga gcagatgata cagtattaga agacataaat ttgccaggaa
241 aatggaaacc aaaaatgata gggggaattg gaggtttcat caaagtaaaa cagtatgatc
301 aaataactat agatatttgt ggacataagg ctacaggtac agtgttagta ggacctacac
361 ctgtcaacat aattggaaga aatatgttga ctcagattgg ttgcacttta aattttccaa
421 ttagtcctat tgaaactgta ccagtaaaat tgaaaccagg aatggatggc ccaaaggtta
481 aacaatggcc attgacagaa gaaaaaataa aagcatt
//
last modified: Tue May 31 10:56 2022