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LOCUS EF583790 691 bp RNA linear VRL 02-JAN-2008
DEFINITION HIV-1 isolate ABB208 from Cameroon envelope glycoprotein (env)
gene, partial cds
ACCESSION EF583790
VERSION EF583790.1 GI:156858193
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 691)
Show all sequences for reference 1
AUTHORS Eshleman,S.H., Hudelson,S.E., Bruce,R., Lee,T., Owens,M.R.,
Hackett,J., Swanson,P., Devare,S.G. and Marlowe,N.
TITLE Analysis of HIV Type 1 gp41 Sequences in Diverse HIV Type 1 Strains
JOURNAL AIDS Res. Hum. Retroviruses 23 (12), 1593-1598 (2007)
PUBMED 18160019
REFERENCE 2 (bases 1 to 691)
Show all sequences for reference 2
AUTHORS Eshleman,S.H., Hudleson,S.E., Bruce,R., Lee,T., Owens,M.R.,
Hackett,J. Jr.., Swanson,P., Devare,S.G. and Marlowe,N.
TITLE Direct Submission
JOURNAL Submitted (27-APR-2007) Department of Pathology, The Johns Hopkins
Medical Institutions, Ross Building 646, 720 Rutland Avenue,
Baltimore, MD 21205, USA
REFERENCE 3
Show all sequences for reference 3
AUTHORS Brennan,C.A., Bodelle,P., Coffey,R., Devare,S.G., Golden,A.,
Hackett,J.J., Harris,B., Holzmayer,V., Luk,K.-C., Schochetman,G.,
Swanson,P., Yamaguchi,J., Vallari,A., Ndembi,N., Ngansop,C.,
Makamche,F., Mbanya,D., Gurtler,L.G., Zekeng,L. and Kaptue,L.
TITLE The prevalence of diverse HIV-1 strains was stable in Cameroonian
blood donors from 1996 to 2004.
JOURNAL J. Acquir. Immune Defic. Syndr.. 49(4); 432-9 (2008)
PUBMED 18931623
FEATURES Location/Qualifiers
source 1..691
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="ABB208"
/db_xref="taxon:11676"
/country="Cameroon"
gene <1..>691
/gene="env"
CDS <1..>691
/gene="env"
/note="gp41"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABU96439.1"
/db_xref="GI:156858194"
/translation="RXELYKYKVVRIEPLGIAPTKAKRRVVEREKRAIGLGALFLGFL
GAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVL
AVERYLKDQQLLGIWGCSGKHICTTNVPWNSSWSXKSLBYIWENMTWMQWEKEIENYT
GVIYTLJEESQVQQXKNEKELLELDKWASLWXWFXISNWLWYIXIFIIIVGGLIGLRI
VFAVLSIVNRVX"
BASE COUNT 235 a 104 c 172 g 171 t 9 other
ORIGIN
1 gagaartgaa ttatataaat ataaagtagt aagaattgaa ccattgggaa tagcacccac
61 caaggcaaag agaagagtgg tggaaagaga aaaaagagca ataggattag gagctttgtt
121 ccttgggttc ttgggagcag caggaagcac gatgggcgca gcgtcagtga cgctgacggt
181 acaggccagg caattattgt ctggtatagt gcaacagcaa aataatttgc tgagggctat
241 agaggcgcaa caacatctgt tgcaactcac agtctggggc attaaacagc tccaggcaag
301 agtcctggct gtggaaagat acctaaagga tcaacagctc ctaggaattt ggggttgctc
361 tggaaaacac atttgcacca ctaatgtgcc ttggaactct agttggagta rtaaatccct
421 arattatatt tgggagaaca tgacctggat gcaatgggag aaagaaattg aaaattacac
481 aggtgtaata tacaccttam ttgaggaatc acaagtccag caagamaaaa atgaaaaaga
541 actattagaa ttggacaagt gggcaagttt gtggarttgg tttarcatat ctaactggct
601 gtggtatata araatattca tcataatagt aggaggctta ataggcttaa gaatagtttt
661 tgctgtgctt tctatagtaa atagagttag s
//
last modified: Tue May 31 10:56 2022