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LOCUS EF583712 630 bp RNA linear VRL 02-JAN-2008
DEFINITION HIV-1 isolate ABB22-96 from Cameroon envelope glycoprotein (env)
gene, partial cds
ACCESSION EF583712
VERSION EF583712.1 GI:156858037
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 630)
Show all sequences for reference 1
AUTHORS Eshleman,S.H., Hudelson,S.E., Bruce,R., Lee,T., Owens,M.R.,
Hackett,J., Swanson,P., Devare,S.G. and Marlowe,N.
TITLE Analysis of HIV Type 1 gp41 Sequences in Diverse HIV Type 1 Strains
JOURNAL AIDS Res. Hum. Retroviruses 23 (12), 1593-1598 (2007)
PUBMED 18160019
REFERENCE 2 (bases 1 to 630)
Show all sequences for reference 2
AUTHORS Eshleman,S.H., Hudleson,S.E., Bruce,R., Lee,T., Owens,M.R.,
Hackett,J. Jr.., Swanson,P., Devare,S.G. and Marlowe,N.
TITLE Direct Submission
JOURNAL Submitted (27-APR-2007) Department of Pathology, The Johns Hopkins
Medical Institutions, Ross Building 646, 720 Rutland Avenue,
Baltimore, MD 21205, USA
REFERENCE 3
Show all sequences for reference 3
AUTHORS Brennan,C.A., Bodelle,P., Coffey,R., Devare,S.G., Golden,A.,
Hackett,J.J., Harris,B., Holzmayer,V., Luk,K.-C., Schochetman,G.,
Swanson,P., Yamaguchi,J., Vallari,A., Ndembi,N., Ngansop,C.,
Makamche,F., Mbanya,D., Gurtler,L.G., Zekeng,L. and Kaptue,L.
TITLE The prevalence of diverse HIV-1 strains was stable in Cameroonian
blood donors from 1996 to 2004.
JOURNAL J. Acquir. Immune Defic. Syndr.. 49(4); 432-9 (2008)
PUBMED 18931623
FEATURES Location/Qualifiers
source 1..630
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="ABB22-96"
/db_xref="taxon:11676"
/country="Cameroon"
gene <1..>630
/gene="env"
CDS <1..>630
/gene="env"
/note="gp41"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABU96361.1"
/db_xref="GI:156858038"
/translation="XAKRRVVEREKRAVGVGAVFLGFLGAAGSTMGAASITLTVQARQ
LLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLALERYLRDQQLLGIWGCSGK
LICTTNVPWNSSWSNKSQEEIWDNMTWLQWDKEISNYTQIIYRLIEESQNQQEKNEQD
LLALDKWSTLWTWFDISNWLWYIKIFIMIVGGLIGLRIVFAVLNVINRVR"
BASE COUNT 208 a 105 c 166 g 150 t 1 other
ORIGIN
1 wgggcaaaaa gaagggtggt ggagagagaa aaaagagcag ttggagtggg agctgtcttc
61 cttgggttct taggagcagc aggaagcact atgggcgcgg cgtcaataac gctgacggta
121 caggccagac aattattgtc tggcatagtg caacagcaaa gcaatttgct gagggctata
181 gaggctcaac aacatctgtt gaaactcacg gtctggggca ttaagcagct ccaggcaaga
241 gtcctggctc tggaaagata cctaagggat caacagctcc taggaatttg gggctgctct
301 ggaaaactca tctgcaccac taatgtgccc tggaactcta gttggagtaa caaatctcag
361 gaagagatat gggataacat gacctggcta caatgggata aagaaattag caattacaca
421 caaataatat atagactaat tgaagaatcg cagaaccagc aggaaaagaa tgaacaagac
481 ttattggcat tggacaagtg gtcaactctg tggacttggt ttgacatatc aaactggcta
541 tggtatatta aaatattcat aatgatagta ggaggcttaa taggtttaag aatagttttt
601 gctgtgctta atgtaataaa tagagttagg
//
last modified: Tue May 31 10:56 2022