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LOCUS	    EF449897		     971 bp    RNA     linear	VRL 13-AUG-2008
DEFINITION  HIV-1 isolate 693270 from Switzerland pol protein (pol) gene,
	    partial cds
ACCESSION   EF449897
VERSION     EF449897.1 GI:134023395
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 971)
            Show all sequences for reference 1
  AUTHORS   von Wyl,V., Yerly,S., Boni,J., Burgisser,P., Klimkait,T.,
	    Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
	    Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
	    Gunthard,H.F.
  CONSRTM   for the Swiss HIV Cohort Study
  TITLE     Emergence of HIV-1 drug resistance in previously untreated patients
	    initiating combination antiretroviral treatment: a comparison of
	    different regimen types
  JOURNAL   Arch. Intern. Med. 167 (16), 1782-1790 (2007)
  PUBMED    17846398
REFERENCE   2 (bases 1 to 971)
            Show all sequences for reference 2
  AUTHORS   von Wyl,V., Yerly,S., Boeni,J., Buergisser,P., Klimkait,T.,
	    Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
	    Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
	    Guenthard,H.F.
  CONSRTM   Swiss HIV Cohort Study
  TITLE     Direct Submission
  JOURNAL   Submitted (22-FEB-2007) Division of Infectious Diseases and
	    Hospital Epidemiology, University Hospital Zurich, Raemistrasse
	    100, Zurich CH-8091, Switzerland
FEATURES             Location/Qualifiers
     source	     1..971
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="693270"
		     /db_xref="taxon:11676"
		     /country="Switzerland"
		     /collection_date="2003"
     gene	     <1..>971
		     /gene="pol"
     CDS	     <1..>971
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABO45555.1"
		     /db_xref="GI:134023396"
		     /translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVRLKSGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPIF
		     AIKKKDSTKWRKLVDFRELNKKTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     LVIYQYMDDLYVGSDLEIGQHRTKIEELREHLLKWGFTTPDKKHQKEP"
BASE COUNT	388 a	 153 c	  196 g    231 t      3 other
ORIGIN
       1 cctcaaatca ctctttggca acgacccctc gtcacaataa aggtaggggg gcagctaaag 
      61 gaagccctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggtatt ggaggtttta tcaaagtaag gcagtatgat 
     181 cagatactca tagaaatctg tggacataaa gctataggta cagtattagt aggacctaca 
     241 cctgtcaata taattggaag aaatctgttg acccagattg gttgyacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaga ttaaaatcag gaatggatgg cccaagagtt 
     361 aaacaatggc cattgacaga agagaaaata aaagcattaa cagaaatttg tacagaaatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccaatattt 
     481 gccataaara aaaaggacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagaaaactc aagatttytg ggaggttcaa ttaggaatac cacatcctgc aggattaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat 
     661 aaagacttca gaaagtatac tgcatttacc atacctagta taaacaatga aacaccaggg 
     721 attagatacc agtacaatgt gcttccgcag ggatggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agaacccttt agaaaacaaa atccagactt agttatctat 
     841 caatacatgg atgatttgta tgtaggatct gacttagaaa taggacagca tagaacaaaa 
     901 atagaagaat tgagagaaca tctgttgaag tgggggttca ccacaccaga taaaaaacat 
     961 cagaaagaac c
//
last modified: Tue May 31 10:56 2022


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