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LOCUS	    EF449891		     971 bp    RNA     linear	VRL 13-AUG-2008
DEFINITION  HIV-1 isolate 4821915 from Switzerland pol protein (pol) gene,
	    partial cds
ACCESSION   EF449891
VERSION     EF449891.1 GI:134023383
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 971)
            Show all sequences for reference 1
  AUTHORS   von Wyl,V., Yerly,S., Boni,J., Burgisser,P., Klimkait,T.,
	    Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
	    Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
	    Gunthard,H.F.
  CONSRTM   for the Swiss HIV Cohort Study
  TITLE     Emergence of HIV-1 drug resistance in previously untreated patients
	    initiating combination antiretroviral treatment: a comparison of
	    different regimen types
  JOURNAL   Arch. Intern. Med. 167 (16), 1782-1790 (2007)
  PUBMED    17846398
REFERENCE   2 (bases 1 to 971)
            Show all sequences for reference 2
  AUTHORS   von Wyl,V., Yerly,S., Boeni,J., Buergisser,P., Klimkait,T.,
	    Battegay,M., Furrer,H., Telenti,A., Hirschel,B., Vernazza,P.L.,
	    Bernasconi,E., Rickenbach,M., Perrin,L., Ledergerber,B. and
	    Guenthard,H.F.
  CONSRTM   Swiss HIV Cohort Study
  TITLE     Direct Submission
  JOURNAL   Submitted (22-FEB-2007) Division of Infectious Diseases and
	    Hospital Epidemiology, University Hospital Zurich, Raemistrasse
	    100, Zurich CH-8091, Switzerland
FEATURES             Location/Qualifiers
     source	     1..971
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="4821915"
		     /db_xref="taxon:11676"
		     /country="Switzerland"
		     /collection_date="2002"
     gene	     <1..>971
		     /gene="pol"
     CDS	     <1..>971
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABO45549.1"
		     /db_xref="GI:134023384"
		     /translation="PQITLWQRPIVTVRIGGQLKEALLDTGADDTVLEDMSLPGKWKP
		     KMIGGIGGFIKVRQYDQIPIEICGHKTIGTVLXGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPRXKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPIF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPGGLKKKKSVTVLDVGDAYFSIP
		     LDEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPD
		     IVIYQYVDDLYVGSDLEIGQHRTKVEELRQHLLKWGLVTPDQKHQKEP"
BASE COUNT	380 a	 160 c	  202 g    225 t      4 other
ORIGIN
       1 cctcagatca ctctttggca gcgacccatc gtcacagtaa ggataggggg gcaactaaag 
      61 gaagctctat tggatacagg agcagatgat acagtattag aagacatgag tttgccagga 
     121 aaatggaaac caaaaatgat aggaggaatt ggaggcttta tcaaagtaag acagtatgat 
     181 cagataccca tagaaatctg tgggcataaa actataggta cagtattart aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg gctgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaaaccag gaatggatgg cccaagartt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgaaaatc catacaatac tccaatattt 
     481 gccataaaga aaaaggacag tactaaatgg agaaaattag tagatttcag ggaacttaat 
     541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgg agggttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttctcaat tcccttagat 
     661 gaggacttca graagtatac tgcatttacc atacctagta caaayaatga gacaccagga 
     721 attagatatc aatacaatgt gcttccacag ggttggaaag gatcaccagc aatattccaa 
     781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccagacat agttatctat 
     841 caatacgtgg atgatttgta tgtaggatct gacttagaaa tagggcagca tagaacaaaa 
     901 gtagaggaac tgagacaaca tctgttgaag tggggattag tcaccccgga ccaaaaacat 
     961 cagaaagaac c
//
last modified: Tue May 31 10:56 2022


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