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LOCUS	    EF432678		     895 bp    RNA     linear	VRL 01-OCT-2007
DEFINITION  HIV-1 isolate fj45 from China pol protein (pol) gene, partial cds
ACCESSION   EF432678
VERSION     EF432678.1 GI:151337607
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 895)
            Show all sequences for reference 1
  AUTHORS   Liu,J., Yue,J., Wu,S. and Yan,Y.
  TITLE     Polymorphisms and drug resistance analysis of HIV-1 CRF01_AE
	    strains circulating in Fujian Province, China
  JOURNAL   Arch. Virol. 152 (10), 1799-1805 (2007)
  PUBMED    17619115
REFERENCE   2 (bases 1 to 895)
            Show all sequences for reference 2
  AUTHORS   Liu,J., Yue,J. and Yan,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2007) Department of Clinical Laboratory, Shanghai
	    Pulmonary Hospital, NO.507 Zhengmin Road, Shanghai 200433, China
COMMENT     drived from drug naive patient.
FEATURES             Location/Qualifiers
     source	     1..895
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="fj45"
		     /isolation_source="drug naive patient"
		     /db_xref="taxon:11676"
		     /country="China: Fujian Province"
		     /note="subtype: CRF01_AE"
     gene	     <1..>895
		     /gene="pol"
		     /note="HXB2 2253-3347"
     CDS	     <1..>895
		     /gene="pol"
		     /note="protease and 5'' end of reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABS01236.1"
		     /db_xref="GI:151337608"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKKAIGSVLVGPTPVNIIGRNMLTQLGCTLNFPIS
		     PIDTVPVTLKPGMDGPKVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQTSMTKILEPFRIKNPE
		     IVIYQYMDDLYVGSDLEIGQHR"
BASE COUNT	355 a	 140 c	  184 g    216 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gtcacaataa aaataggagg acagctgaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagacataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag gcaatatgat 
     181 cagatactta tagaaatttg tggaaaaaag gctataggtt cagtgttagt aggacctaca 
     241 cctgtcaaca taattggacg aaatatgttg actcagcttg gatgtacttt aaatttccca 
     301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg accaaaggtt 
     361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagaaatttg taaagaaatg 
     421 gaagaggaag gaaaaatctc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaggacag caccaaatgg aggaaattag tagatttcag agagctcaat 
     541 aaaagaactc aggatttttg ggaagttcaa ttaggaatac cacatccagc aggtttaaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggggatgcat atttttcagt tcctttagat 
     661 gaaagcttta gaaagtatac tgcattcacc atacctagta taaacaatga gacaccagga 
     721 atcagatatc agtacaatgt gctgccacag ggatggaaag gatcaccggc aatattccag 
     781 actagcatga caaaaatctt agagcccttt agaataaaaa atccagaaat agttatctat 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagaa
//
last modified: Tue May 31 10:56 2022


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