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LOCUS	    EF432672		     895 bp    RNA     linear	VRL 01-OCT-2007
DEFINITION  HIV-1 isolate fj26 from China pol protein (pol) gene, partial cds
ACCESSION   EF432672
VERSION     EF432672.1 GI:151337595
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 895)
            Show all sequences for reference 1
  AUTHORS   Liu,J., Yue,J., Wu,S. and Yan,Y.
  TITLE     Polymorphisms and drug resistance analysis of HIV-1 CRF01_AE
	    strains circulating in Fujian Province, China
  JOURNAL   Arch. Virol. 152 (10), 1799-1805 (2007)
  PUBMED    17619115
REFERENCE   2 (bases 1 to 895)
            Show all sequences for reference 2
  AUTHORS   Liu,J., Yue,J. and Yan,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2007) Department of Clinical Laboratory, Shanghai
	    Pulmonary Hospital, NO.507 Zhengmin Road, Shanghai 200433, China
COMMENT     drived from drug naive patient.
FEATURES             Location/Qualifiers
     source	     1..895
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="fj26"
		     /isolation_source="drug naive patient"
		     /db_xref="taxon:11676"
		     /country="China: Fujian Province"
		     /note="subtype: CRF01_AE"
     gene	     <1..>895
		     /gene="pol"
		     /note="HXB2 2253-3347"
     CDS	     <1..>895
		     /gene="pol"
		     /note="protease and 5'' end of reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABS01230.1"
		     /db_xref="GI:151337596"
		     /translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVFEDINLPGKWKP
		     KMIGGIGGFIRVRQYDQIPIEICGKKAVGTVLVGPTPVNIIGRNMLTQIGCTFKFPIS
		     PIDTVPVTLKPGMDGPKGIQWPLAEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDENFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
		     IVIYQYMDDLYVGSDLEIGQHR"
BASE COUNT	349 a	 137 c	  191 g    218 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gtcacagtaa aaataggagg acagttaaaa 
      61 gaagctctat tagatacagg agcagatgat acagtatttg aagatataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcagggtaag acaatatgat 
     181 cagataccta tagaaatttg tggaaaaaag gctgtaggta cagtgttagt aggacctaca 
     241 cctgtcaaca taattggacg aaatatgttg actcagattg ggtgtacttt taaatttcca 
     301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg accaaagggt 
     361 atacagtggc cattggcaga agaaaaaata aaagcattaa cagaaatttg taaagaaatg 
     421 gaagaggaag ggaaaatctc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaagacag caccaaatgg aggaaattag tagatttcag agagctcaat 
     541 aaaagaactc aggacttttg ggaagttcaa ttaggaatac cgcatccagc aggtttaaaa 
     601 aagaaaaaat cagtaactgt actagatgtg ggagatgcat atttttcagt tcctttagat 
     661 gaaaacttta gaaagtatac tgcattcacc atacctagta caaacaatga gacaccagga 
     721 atcagatatc agtataatgt gctgccacag ggatggaaag gatcaccggc aatattccag 
     781 agtagcatga caaaaatctt agagcccttt agaataaaaa atccggagat agttatctat 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagaa
//
last modified: Tue May 31 10:56 2022


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