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LOCUS	    EF432671		     895 bp    RNA     linear	VRL 01-OCT-2007
DEFINITION  HIV-1 isolate fj25 from China pol protein (pol) gene, partial cds
ACCESSION   EF432671
VERSION     EF432671.1 GI:151337593
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 895)
            Show all sequences for reference 1
  AUTHORS   Liu,J., Yue,J., Wu,S. and Yan,Y.
  TITLE     Polymorphisms and drug resistance analysis of HIV-1 CRF01_AE
	    strains circulating in Fujian Province, China
  JOURNAL   Arch. Virol. 152 (10), 1799-1805 (2007)
  PUBMED    17619115
REFERENCE   2 (bases 1 to 895)
            Show all sequences for reference 2
  AUTHORS   Liu,J., Yue,J. and Yan,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2007) Department of Clinical Laboratory, Shanghai
	    Pulmonary Hospital, NO.507 Zhengmin Road, Shanghai 200433, China
COMMENT     drived from drug naive patient.
FEATURES             Location/Qualifiers
     source	     1..895
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="fj25"
		     /isolation_source="drug naive patient"
		     /db_xref="taxon:11676"
		     /country="China: Fujian Province"
		     /note="subtype: CRF01_AE"
     gene	     <1..>895
		     /gene="pol"
		     /note="HXB2 2253-3347"
     CDS	     <1..>895
		     /gene="pol"
		     /note="protease and 5'' end of reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABS01229.1"
		     /db_xref="GI:151337594"
		     /translation="PQITLWQRPLVTVKIGGQLREALLDTGADDTVLEEINLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVSIIGRNMLTQLGCTLNFPIS
		     PIDTVPAKLKPGMDGPKVKQWPLTEEKIRALTEICKEMEEEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
		     IVIYQYMDDLYVGSDLEIGQHR"
BASE COUNT	353 a	 138 c	  190 g    214 t
ORIGIN
       1 cctcaaatca ctctttggca gcgacccctt gtcacagtaa aaataggagg gcagctaaga 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag gcaatatgat 
     181 cagatactta tagaaatttg tggaaaaaag gctataggta cagtattagt aggacctaca 
     241 cctgtcagca taattggacg aaatatgttg actcagcttg gttgtacttt aaatttccca 
     301 attagtccta ttgacactgt accagcaaaa ttaaagccag gaatggatgg accaaaggtt 
     361 aaacagtggc cattgacaga agaaaaaata agagcattaa cagaaatttg taaagaaatg 
     421 gaagaggaag gaaaaatctc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaggacag caccaaatgg agaaaattag tagatttcag agagctcaat 
     541 aaaaggactc aagacttttg ggaagttcaa ttaggaatac cacatccagc aggtttaaag 
     601 aagaaaaaat cagtaacagt actggatgtg ggagatgcat atttttcagt tcctttagat 
     661 gaaagcttta gaaagtatac tgcatttacc ataccgagta taaacaatga gacaccaggg 
     721 atcagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag 
     781 agtagcatga caaaaatctt agagcccttt agaataaaaa atccagaaat agttatctat 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagaa
//
last modified: Tue May 31 10:56 2022


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