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LOCUS	    EF432665		     895 bp    RNA     linear	VRL 01-OCT-2007
DEFINITION  HIV-1 isolate fj11 from China pol protein (pol) gene, partial cds
ACCESSION   EF432665
VERSION     EF432665.1 GI:151337581
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 895)
            Show all sequences for reference 1
  AUTHORS   Liu,J., Yue,J., Wu,S. and Yan,Y.
  TITLE     Polymorphisms and drug resistance analysis of HIV-1 CRF01_AE
	    strains circulating in Fujian Province, China
  JOURNAL   Arch. Virol. 152 (10), 1799-1805 (2007)
  PUBMED    17619115
REFERENCE   2 (bases 1 to 895)
            Show all sequences for reference 2
  AUTHORS   Liu,J., Yue,J. and Yan,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2007) Department of Clinical Laboratory, Shanghai
	    Pulmonary Hospital, NO.507 Zhengmin Road, Shanghai 200433, China
COMMENT     drived from drug naive patient.
FEATURES             Location/Qualifiers
     source	     1..895
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="fj11"
		     /isolation_source="drug naive patient"
		     /db_xref="taxon:11676"
		     /country="China: Fujian Province"
		     /note="subtype: CRF01_AE"
     gene	     <1..>895
		     /gene="pol"
		     /note="HXB2 2253-3347"
     CDS	     <1..>895
		     /gene="pol"
		     /note="protease and 5'' end of reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABS01223.1"
		     /db_xref="GI:151337582"
		     /translation="PQITLWQRPLVTVKIEGQIKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPIS
		     PIDTVPVTLKPGMDGPKVKQWPLTEEKIKALTEICKEMEEEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
		     MVIYQYMDDLYVGSDLEIGQHR"
BASE COUNT	353 a	 133 c	  189 g    220 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gtcacagtaa aaatagaagg acagataaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagatataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta ttaaggtaag gcaatatgat 
     181 cagatactta tagaaatttg tgggaaaaag gctataggta cagtattagt aggacccacg 
     241 cctgtcaaca taattggacg aaatatgttg actcagattg gttgtacttt aaatttccca 
     301 attagtccta ttgacactgt accagtaaca ttaaagccag gaatggatgg accaaaggtt 
     361 aaacagtggc cattgacaga agaaaaaata aaagcattaa cagaaatttg taaagagatg 
     421 gaagaggaag gaaaaatctc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gctataaaga aaaaggacag caccaaatgg aggaaattag tagatttcag agagcttaat 
     541 aaaagaactc aggatttttg ggaagttcaa ttaggaatac cgcatccggc aggtttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggagatgcat atttttcagt tcctttagat 
     661 gaaagtttca gaaagtatac tgcattcacc atacctagta taaataatga gacaccagga 
     721 atcagatatc agtacaatgt gctgccacag ggatggaaag gatcaccagc aatattccag 
     781 agtagcatga caaaaatctt agagcccttt agaataaaaa atccagaaat ggttatttat 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagaa
//
last modified: Tue May 31 10:56 2022


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