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LOCUS	    EF432663		     895 bp    RNA     linear	VRL 01-OCT-2007
DEFINITION  HIV-1 isolate fj08 from China pol protein (pol) gene, partial cds
ACCESSION   EF432663
VERSION     EF432663.1 GI:151337577
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 895)
            Show all sequences for reference 1
  AUTHORS   Liu,J., Yue,J., Wu,S. and Yan,Y.
  TITLE     Polymorphisms and drug resistance analysis of HIV-1 CRF01_AE
	    strains circulating in Fujian Province, China
  JOURNAL   Arch. Virol. 152 (10), 1799-1805 (2007)
  PUBMED    17619115
REFERENCE   2 (bases 1 to 895)
            Show all sequences for reference 2
  AUTHORS   Liu,J., Yue,J. and Yan,Y.
  TITLE     Direct Submission
  JOURNAL   Submitted (11-FEB-2007) Department of Clinical Laboratory, Shanghai
	    Pulmonary Hospital, NO.507 Zhengmin Road, Shanghai 200433, China
COMMENT     drived from drug naive patient.
FEATURES             Location/Qualifiers
     source	     1..895
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="fj08"
		     /isolation_source="drug naive patient"
		     /db_xref="taxon:11676"
		     /country="China: Fujian Province"
		     /note="subtype: CRF01_AE"
     gene	     <1..>895
		     /gene="pol"
		     /note="HXB2 2253-3347"
     CDS	     <1..>895
		     /gene="pol"
		     /note="protease and 5'' end of reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABS01221.1"
		     /db_xref="GI:151337578"
		     /translation="PQITLWQRPLVTVKIGGQLKEALLDTGADDTVLEEINLPGKWKP
		     KMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQIGCTLNIPIS
		     PIDTVPVALKPGMDGPKVKQWPLTEEKIKALTENCEEMEKEGKISKNGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
		     IVIYQYMDDLYVGSDLEIGQHR"
BASE COUNT	355 a	 139 c	  186 g    215 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctt gtcacagtaa aaataggagg acagctgaaa 
      61 gaagctctat tagatacagg agcagatgat acagtattag aagaaataaa tttgccagga 
     121 aaatggaaac caaaaatgat agggggaatt ggaggtttta ttaaagtaag acaatatgat 
     181 cagatactta tagaaatttg tggaaaaaag gctataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggacg aaatatgttg actcagattg ggtgtacttt aaatattccc 
     301 attagtccta ttgacactgt accagtagca ttaaagcccg gaatggatgg acccaaggtt 
     361 aaacagtggc cactgacaga agaaaaaata aaagcattaa cagaaaattg tgaagagatg 
     421 gaaaaggaag gaaaaatctc aaaaaatggg cctgaaaatc catataatac tccagtattt 
     481 gctataaaga aaaaggacag cactaaatgg aggaaattag tagatttcag ggagcttaat 
     541 aaaagaactc aagacttttg ggaagttcaa ttaggaatac cgcatccagc aggtttaaaa 
     601 aagaaaaaat cagtaacagt actagatgtg ggagatgcat atttttcagt tcctctagat 
     661 gaaagcttta gaaagtatac tgcattcacc atacctagta taaacaatga gacacccgga 
     721 atcagatatc aatacaatgt gctgccacag ggatggaaag gatcaccggc aatattccag 
     781 agtagcatga caaaaatttt agagcccttt agaataaaaa accccgaaat agttatttat 
     841 caatacatgg atgacttgta tgtaggatct gatttagaaa tagggcagca cagaa
//
last modified: Tue May 31 10:56 2022


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