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LOCUS	    EF193982		    1129 bp    RNA     linear	VRL 02-MAY-2007
DEFINITION  HIV-1 isolate CH83 from Chile pol protein (pol) gene, partial cds
ACCESSION   EF193982
VERSION     EF193982.1 GI:145982573
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1129)
            Show all sequences for reference 1
  AUTHORS   Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P., de
	    Parga,E.V., Yung,V., Thomson,M.M. and Najera,R.
  TITLE     Antiretroviral drug resistance and phylogenetic diversity of HIV-1
	    in Chile
  JOURNAL   J. Med. Virol. 79 (6), 647-656 (2007)
  PUBMED    17457921
REFERENCE   2 (bases 1 to 1129)
            Show all sequences for reference 2
  AUTHORS   Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P.,
	    Vazquez de Parga,E., Yung,V., Thomson,M. and Najera,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2006) Patogenia Viral, Instituto de Salud Carlos
	    III, Ctra Majadahonda a Pozuelo, km 2, Majadahonda, Madrid 28220,
	    Spain
FEATURES             Location/Qualifiers
     source	     1..1129
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="CH83"
		     /db_xref="taxon:11676"
		     /country="Chile"
     gene	     <1..>1129
		     /gene="pol"
     CDS	     <1..>1129
		     /gene="pol"
		     /note="PR-RT"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABQ01061.1"
		     /db_xref="GI:145982574"
		     /translation="PQITLWQRPVVTIKIEGQLKEALLDTGADDTVLEDMNLSGXWKP
		     KMIGGIGGFIKVRQYDQILIEICGHKTIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTXMEKEGKISKIGPENPYNTPVF
		     AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LYEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILXPFRKQNPD
		     IVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVK"
BASE COUNT	434 a	 182 c	  234 g    265 t     14 other
ORIGIN
       1 cctcagatca ctctttggca acgacccgty gtcacaataa agatagaggg gcaactaaag 
      61 gaagctctat tagatacagg rgcagatgat acagtattag aagacatgaa tttgtcagga 
     121 aratggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat 
     181 cagatactca tagaaatytg yggrcataaa actataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag aaatytgttg actcagattg gttgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagasatg 
     421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt 
     481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaac 
     541 aaaagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttytcagt tcccttatat 
     661 gaagacttca graagtatac tgcatttacc atacctagta taaacaatga gacaccaggg 
     721 attagatacc agtacaatgt gcttccacag ggatggaarg gatcaccagc aatattccaa 
     781 tgtagcatga caaaaatctt agrgcctttt agaaaacaga atccagacat agttatctat 
     841 caatacatgg atgatttgta tgtaggatca gacttagaaa tagggcaaca tagagcaaaa 
     901 atagaggaac tgagacaaca cctgttgagg tggggrttta ccacaccaga taagaaacat 
     961 caaaargaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagcctataa agctgccaga aaaagacagc tggactgtca atgacataca gaagttagtg 
    1081 ggaaaactga attgggcaag tcagatttat ccagggatta aggtaaagc
//
last modified: Tue May 31 10:56 2022


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