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LOCUS EF193982 1129 bp RNA linear VRL 02-MAY-2007
DEFINITION HIV-1 isolate CH83 from Chile pol protein (pol) gene, partial cds
ACCESSION EF193982
VERSION EF193982.1 GI:145982573
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1129)
Show all sequences for reference 1
AUTHORS Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P., de
Parga,E.V., Yung,V., Thomson,M.M. and Najera,R.
TITLE Antiretroviral drug resistance and phylogenetic diversity of HIV-1
in Chile
JOURNAL J. Med. Virol. 79 (6), 647-656 (2007)
PUBMED 17457921
REFERENCE 2 (bases 1 to 1129)
Show all sequences for reference 2
AUTHORS Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P.,
Vazquez de Parga,E., Yung,V., Thomson,M. and Najera,R.
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2006) Patogenia Viral, Instituto de Salud Carlos
III, Ctra Majadahonda a Pozuelo, km 2, Majadahonda, Madrid 28220,
Spain
FEATURES Location/Qualifiers
source 1..1129
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="CH83"
/db_xref="taxon:11676"
/country="Chile"
gene <1..>1129
/gene="pol"
CDS <1..>1129
/gene="pol"
/note="PR-RT"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABQ01061.1"
/db_xref="GI:145982574"
/translation="PQITLWQRPVVTIKIEGQLKEALLDTGADDTVLEDMNLSGXWKP
KMIGGIGGFIKVRQYDQILIEICGHKTIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTXMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LYEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILXPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRAKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIKLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVK"
BASE COUNT 434 a 182 c 234 g 265 t 14 other
ORIGIN
1 cctcagatca ctctttggca acgacccgty gtcacaataa agatagaggg gcaactaaag
61 gaagctctat tagatacagg rgcagatgat acagtattag aagacatgaa tttgtcagga
121 aratggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagatactca tagaaatytg yggrcataaa actataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatytgttg actcagattg gttgcacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagasatg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagatttcag agaacttaac
541 aaaagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa
601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttytcagt tcccttatat
661 gaagacttca graagtatac tgcatttacc atacctagta taaacaatga gacaccaggg
721 attagatacc agtacaatgt gcttccacag ggatggaarg gatcaccagc aatattccaa
781 tgtagcatga caaaaatctt agrgcctttt agaaaacaga atccagacat agttatctat
841 caatacatgg atgatttgta tgtaggatca gacttagaaa tagggcaaca tagagcaaaa
901 atagaggaac tgagacaaca cctgttgagg tggggrttta ccacaccaga taagaaacat
961 caaaargaac ctccattcct ttggatgggt tatgaactcc atcctgataa atggacagta
1021 cagcctataa agctgccaga aaaagacagc tggactgtca atgacataca gaagttagtg
1081 ggaaaactga attgggcaag tcagatttat ccagggatta aggtaaagc
//
last modified: Tue May 31 10:56 2022