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LOCUS EF193903 1129 bp RNA linear VRL 02-MAY-2007
DEFINITION HIV-1 isolate CH18 from Chile pol protein (pol) gene, partial cds
ACCESSION EF193903
VERSION EF193903.1 GI:145982415
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1129)
Show all sequences for reference 1
AUTHORS Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P., de
Parga,E.V., Yung,V., Thomson,M.M. and Najera,R.
TITLE Antiretroviral drug resistance and phylogenetic diversity of HIV-1
in Chile
JOURNAL J. Med. Virol. 79 (6), 647-656 (2007)
PUBMED 17457921
REFERENCE 2 (bases 1 to 1129)
Show all sequences for reference 2
AUTHORS Rios,M., Delgado,E., Perez-Alvarez,L., Fernandez,J., Galvez,P.,
Vazquez de Parga,E., Yung,V., Thomson,M. and Najera,R.
TITLE Direct Submission
JOURNAL Submitted (21-DEC-2006) Patogenia Viral, Instituto de Salud Carlos
III, Ctra Majadahonda a Pozuelo, km 2, Majadahonda, Madrid 28220,
Spain
FEATURES Location/Qualifiers
source 1..1129
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="CH18"
/db_xref="taxon:11676"
/country="Chile"
gene <1..>1129
/gene="pol"
CDS <1..>1129
/gene="pol"
/note="PR-RT"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABQ00982.1"
/db_xref="GI:145982416"
/translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDMNLPGRWKP
KMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLMTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKNKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPG
IVIYQYMDDLYVGSDLEIGQHRAKVEELRQHLFKWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPITLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVK"
BASE COUNT 434 a 188 c 242 g 264 t 1 other
ORIGIN
1 cctcaaatca ctctttggca acgacccctc gtcacaataa aggtaggggg gcagctaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagacatgaa tttgccagga
121 agatggaagc caaaaatgat agggggaatt ggaggtttta tcaaagtcag acagtatgat
181 cagataccca tagaaatctg tggacataaa gctataggta cagtattagt aggacctaca
241 cctgtcaaca taattggaag aaatctgatg actcagattg gctgtacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtc
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg
421 gagaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaayac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagacttcag agaacttaac
541 aagagaactc aagacttctg ggaagttcag ttaggaatac cacatcctgc agggttaaaa
601 aagaacaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagac
661 aaagacttta gaaagtatac tgcatttact atacctagta taaacaatga gacaccaggg
721 attaggtatc agtacaatgt acttccacag ggatggaaag gatcaccagc aatattccaa
781 agtagcatga caaaaatctt agagcctttt agaaaacaaa atccaggaat agttatctat
841 caatacatgg atgatttgta tgtaggatct gacttagaaa taggacagca tagagcaaaa
901 gtagaggaac tgagacagca tctgtttaag tggggattta ccacgccaga caaaaaacat
961 cagaaagaac ccccattcct ttggatgggt tatgaactcc atcctgataa atggacagtg
1021 cagcctataa cgctgccaga aaaggacagc tggactgtca atgacataca gaagttagtg
1081 ggaaaattaa attgggcaag tcagatttat gcagggatta aagtaaaac
//
last modified: Tue May 31 10:56 2022