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LOCUS	    EF159971		    2586 bp    DNA     linear	VRL 09-NOV-2007
DEFINITION  HIV-1 isolate H3 from USA envelope glycoprotein (env) gene,
	    complete cds
ACCESSION   EF159971
VERSION     EF159971.1 GI:131059727
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 2586)
            Show all sequences for reference 1
  AUTHORS   Gilbert,M.T.P., Rambaut,A., Wlasiuk,G., Spira,T.J., Pitchenik,A.E.
	    and Worobey,M.
  TITLE     The emergence of HIV/AIDS in the Americas and beyond.
  JOURNAL   Proc. Natl. Acad. Sci. U. S. A.. 104(47); 18566-70 (2007)
  PUBMED    17978186
REFERENCE   2 (bases 1 to 2586)
            Show all sequences for reference 2
  AUTHORS   Gilbert,M.T.P., Rambaut,A., Wlasiuk,G., Spira,T.J., Pitchenik,A.E.
	    and Worobey,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (17-NOV-2006) Ecology and Evolutionary Biology,
	    University of Arizona, 1041 E. Lowell St., Tucson, AZ 85721, USA
FEATURES             Location/Qualifiers
     source	     1..2586
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="H3"
		     /isolation_source="Haitian immigrant"
		     /db_xref="taxon:11676"
		     /country="USA"
		     /collection_date="11-May-1982"
		     /note="subtype: B"
     gene	     1..2586
		     /gene="env"
     CDS	     1..2586
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABO33021.1"
		     /db_xref="GI:131059728"
		     /translation="MRVKEMRKHWQHLWRGGTLLLGMLMICSAVQNLWVTVYYGVPVW
		     KEASTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLVNVTENFNIWKNTMVEQ
		     MHEDIISLWDQSLKPCVKLTPLCVTLNCTNAKVGNGTNANRNNTTNNSTMKEGEMKNC
		     SFKITTPVRDKVQKEYALFYDLDVVPIKDNDNNDNSSYRSYRLINCNTSVITQACPKV
		     SFEPIPIHYCAPAGFAILKCNDKKFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLA
		     EEEIVIRSENLTDNAKTIIVQLNKSVEINCIRPNNNTRKSIHIAPGRAFYGTDIIGDI
		     RKAYCNISRKDWNNTLEQVVTKLRELFKNKTIIFNSSSGGDPEIVFHSFNCGGEFFYC
		     NTTQLFNSTWNSSGSRIEGSNNTEQNITLPCRIKQIINMWQEVGKAMYAPPIQGQIKC
		     SSNITGLLLTRDGGNNNTNETFRPGGGYMKDNWRSELYKYKVVKIEPLGVAPTMAKRR
		     VVQREKRAVGALGAMFLGFLGAAGSTMGAASMALTVQARQLLSGIVQQQNNLLRAIEA
		     QQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSY
		     NEIWDNMTWMEWEREIDNYTGLIYTLIEQSQNQQEKNEQELLELDKWDSLWNWFSITN
		     WLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTHLPAPRGPDRPEGIEE
		     EGGERDRDRSTRLVHGFLALIWDDLRSLCLFSYHRLRDLLLIVARIVELLGRRGWEAL
		     KYWGNLLQYWRQELKSSAVSLLNATAIAVGEGTDRIIEAARRIFRAFLHIPRRIRQGL
		     ERALL"
BASE COUNT	911 a	 429 c	  604 g    642 t
ORIGIN
       1 atgagagtga aggagatgag gaagcattgg cagcacttgt ggagaggggg caccttgctc 
      61 cttgggatgt tgatgatctg tagtgctgta caaaacttgt gggtcacagt ctattatggg 
     121 gtacctgtgt ggaaagaagc atccaccact ctattttgtg catcagatgc aaaagcatat 
     181 gacacagagg tacataatgt ctgggccaca catgcctgtg tacccacaga ccccaaccca 
     241 caagaagtag tattggtaaa tgtgacagaa aattttaaca tatggaaaaa taccatggta 
     301 gaacagatgc atgaggatat aatcagttta tgggatcaaa gcctaaagcc atgtgtaaaa 
     361 ttaaccccac tctgtgttac tttaaattgc actaatgcta aggtggggaa tggtactaat 
     421 gccaatagaa ataatactac taataatagc acaatgaagg aaggagaaat gaaaaactgc 
     481 tctttcaaga tcaccacacc tgtaagagat aaggtgcaga aagaatatgc attattttat 
     541 gaccttgatg tagtaccaat aaaggataat gataataatg ataatagtag ctatagaagt 
     601 tatagattga taaattgtaa tacctcagtc attacccaag cctgtccaaa ggtatccttt 
     661 gagccaattc ccatacatta ttgtgccccg gctggttttg cgattctaaa atgtaatgat 
     721 aagaagttca atggaacagg accatgtaaa aatgtcagca cagtacaatg tacacatgga 
     781 attaggccag tagtgtcaac tcaactgctg ttaaatggca gtctagcaga agaagagata 
     841 gtaattagat ctgaaaatct cacggacaat gctaaaacca taatagtaca gctgaataaa 
     901 tctgtagaaa ttaattgtat aagacccaat aacaacacaa gaaaaagtat acatatagca 
     961 ccagggagag cattttatgg aacagacata ataggagata taagaaaagc atattgtaac 
    1021 attagtagaa aagattggaa taacacttta gaacaagtag ttacaaaatt aagagaacta 
    1081 tttaagaata aaacaataat ctttaattca tcctcaggag gggacccaga aattgtattt 
    1141 cacagtttta attgtggagg ggaatttttc tactgtaata caacacaact gtttaatagt 
    1201 acttggaata gttctgggag taggattgaa gggtcaaata acactgaaca aaatatcaca 
    1261 ctcccatgca gaataaaaca aattataaac atgtggcagg aagtaggaaa agcaatgtat 
    1321 gcccctccca tccagggaca aattaaatgt tcatcaaata ttacagggct gttattaaca 
    1381 agagatgggg gtaataataa tacaaacgag accttcagac ctggaggagg atatatgaag 
    1441 gacaattgga gaagtgaatt atataaatat aaagtagtaa aaattgaacc attaggagta 
    1501 gcacccacca tggcaaagag aagagtggtg caaagagaaa aaagagcagt gggagcatta 
    1561 ggagctatgt tccttgggtt cttgggagca gcaggaagca ctatgggcgc agcgtcaatg 
    1621 gcgctgacgg tacaggccag acaattattg tctggtatag tgcaacagca gaacaatttg 
    1681 ctgagagcta ttgaggcgca acagcatctg ttgcaactca cggtctgggg catcaaacag 
    1741 ctccaggcaa gagtcctggc tgtggaaaga tacctaaagg atcaacagct cctagggatt 
    1801 tggggttgct ctggaaaact catttgcacc actgctgtac cttggaatgc tagttggagt 
    1861 aataaatctt ataatgaaat ttgggataac atgacctgga tggagtggga aagggaaatt 
    1921 gacaattaca caggcttaat atacacctta attgaacaat cgcaaaatca gcaagaaaag 
    1981 aatgaacaag aattattaga attggataag tgggacagtt tgtggaattg gtttagtata 
    2041 acaaactggc tgtggtatat aaaaatattc ataatgatag taggaggctt aataggttta 
    2101 agaatagttt ttactgtact ttctatagtg aatagagtta ggcagggcta ctcaccatta 
    2161 tcatttcaga cccacctccc agctccgagg ggacccgaca ggccagaagg aatagaagaa 
    2221 gaaggtggag agagagacag agacagatcc actcgcttag tgcatggatt cttagcactc 
    2281 atctgggacg atctgcggag cctgtgcctc ttcagctacc accgcttgag agacttactc 
    2341 ttgattgtag cgaggattgt ggaacttctg ggacgcaggg ggtgggaagc cctcaagtat 
    2401 tgggggaatc tcctgcagta ttggagacag gaactaaaga gtagtgctgt tagcttgctt 
    2461 aatgccacag caatagcagt aggtgaaggg acagatagga ttatagaagc agcaagaaga 
    2521 atttttagag cttttctcca catacctaga cgaataagac agggcttgga aagggctttg 
    2581 ctataa
//
last modified: Tue May 31 10:56 2022


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