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LOCUS DQ832164 1212 bp DNA linear VRL 08-NOV-2006
DEFINITION HIV-1 isolate 05-132919 from USA pol protein (pol) gene, partial
cds
ACCESSION DQ832164
VERSION DQ832164.1 GI:111053021
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1212)
Show all sequences for reference 1
AUTHORS Viani,R.M., Peralta,L., Aldrovandi,G., Kapogiannis,B.G.,
Mitchell,R., Spector,S.A., Lie,Y.S., Weidler,J.M., Bates,M.P.,
Liu,N. and Wilson,C.M.
CONSRTM Adolescent Medicine Trials Network for HIV/AIDS Interventions
TITLE Prevalence of Primary HIV-1 Drug Resistance among Recently Infected
Adolescents: A Multicenter Adolescent Medicine Trials Network for
HIV/AIDS Interventions Study
JOURNAL J. Infect. Dis. 194 (11), 1505-1509 (2006)
PUBMED 17083034
REFERENCE 2 (bases 1 to 1212)
Show all sequences for reference 2
AUTHORS Wilson,C.M., Viani,R.M., Aldrovandi,G., Kapogiannis,B.G.,
Mitchell,R., Spector,S.A., Lie,Y.S., Weidler,J.M., Bates,M.P. and
Liu,N.
CONSRTM Adolescent Medicine Network for HIV/AIDS Interventions (ATN)
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2006) Pediatrics and Medicine, University of
Alabama at Birmingham, 845 19th South BBRB 220A, Birmingahm, AL
35294, USA
FEATURES Location/Qualifiers
source 1..1212
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="05-132919"
/isolation_source="patient with recently acquired HIV
infection (<180 days)"
/db_xref="taxon:11676"
/country="USA"
gene <1..>1212
/gene="pol"
CDS <1..>1212
/gene="pol"
/note="RT-PR"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="ABH03771.1"
/db_xref="GI:111053022"
/translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEEMNLPGKWKP
KMIGGIGGFIKVRQYDQILVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVF
AIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
LDKDFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNPD
IVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGFTTPDKKHQKEPPFLWMGYELH
PDKWTVQPIMLPEKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGAKALTEVI
PLTEEAELELAE"
BASE COUNT 476 a 193 c 257 g 286 t
ORIGIN
1 cctcagatca ctctttggca acgacccctc gtcacaataa aagtaggggg gcaactaaag
61 gaagctctat tagatacagg agcagatgat acagtattag aagaaatgaa tttgccagga
121 aaatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat
181 cagatacttg tagaaatctg tggacataaa gctataggta cagtattagt aggacctaca
241 ccagtcaaca taattggaag aaatctgttg actcaaattg ggtgtacttt aaattttccc
301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt
361 aaacaatggc cattgacaga agaaaaaata aaagcattag tagaaatttg tacagaaatg
421 gaaaaggaag ggaaaatttc aaaaattggg cctgaaaatc catacaatac tccagtattt
481 gccataaaga aaaaagacag tactaaatgg agaaaattag tagattttag agaacttaat
541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc agggttaaaa
601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttttcagt tcccttagat
661 aaagacttca gaaagtatac tgcatttacc atacctagtg taaacaatga gacaccaggg
721 attagatatc agtacaatgt gcttccacag ggatggaaag gatcaccagc aatattccaa
781 tgtagcatga caaaaatctt agagcctttt agaaaacaaa atccagatat agttatctat
841 cagtacatgg atgatttgta tgtaggatct gacttagaaa tagggcaaca tagaacaaaa
901 atagaggaac tgagacaaca tttgttgagg tggggattta ccacaccaga caaaaaacat
961 cagaaagaac ccccatttct ttggatgggt tatgaactcc accctgataa atggacagta
1021 cagcctataa tgctgccaga aaaagacagc tggactgtca atgacataca aaagttagtg
1081 ggaaaattga attgggcaag tcagatttat gcagggatta aagtaaagca gttatgtaaa
1141 ctccttaggg gagccaaagc attgacagaa gtaataccac taacagaaga agcagagcta
1201 gaactggcag ag
//
last modified: Tue May 31 10:56 2022