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LOCUS	    DQ493671		     693 bp    RNA     linear	VRL 25-APR-2007
DEFINITION  HIV-1 clone 178C from USA gag protein (gag) gene, partial cds
ACCESSION   DQ493671
VERSION     DQ493671.1 GI:95118187
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 693)
            Show all sequences for reference 1
  AUTHORS   Boritz,E., Rapaport,E.L., Campbell,T.B., Koeppe,J.R. and
	    Wilson,C.C.
  TITLE     CD4(+) T cell targeting of human immunodeficiency virus type 1
	    (HIV-1) peptide sequences present in vivo during chronic,
	    progressive HIV-1 disease
  JOURNAL   Virology 361 (1), 34-44 (2007)
  PUBMED    17169395
REFERENCE   2 (bases 1 to 693)
            Show all sequences for reference 2
  AUTHORS   Boritz,E.A., Rapaport,E.L., Campbell,T.B., Koeppe,J.R. and
	    Wilson,C.C.
  TITLE     Direct Submission
  JOURNAL   Submitted (14-APR-2006) Immunology, Medicine, and Microbiology,
	    University of Colorado Health Sciences Center, 4200 East Ninth
	    Avenue, Denver, CO 80262, USA
FEATURES             Location/Qualifiers
     source	     1..693
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="subject UH178 p24 coding sequence C"
		     /isolation_source="plasma"
		     /db_xref="taxon:11676"
		     /clone="178C"
		     /country="USA"
     gene	     <1..>693
		     /gene="gag"
     CDS	     <1..>693
		     /gene="gag"
		     /note="p24 capsid protein"
		     /codon_start="1"
		     /transl_table="1"
		     /product="gag protein"
		     /protein_id="ABF57101.1"
		     /db_xref="GI:95118188"
		     /translation="PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFAALS
		     EGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGS
		     DIAGTTSTLQEQIGWMTSNPPTPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEP
		     FRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTAC
		     QGVGGPSHKARVL"
BASE COUNT	254 a	 136 c	  166 g    137 t
ORIGIN
       1 cctatagtac agaacctcca ggggcaaatg gtacatcagg ccatatcgcc tagaacctta 
      61 aatgcatggg taaaagtagt agaagagaag gctttcagcc cggaggtaat acccatgttt 
     121 gcagcattat cagaaggagc caccccacaa gatttaaaca ccatgctaaa cacagtgggg 
     181 ggacatcagg cagccatgca aatgttaaaa gagaccatca atgaggaagc tgcagaatgg 
     241 gatagattgc acccagtgca tgcaggacct attgcaccag gtcagatgag agaaccaagg 
     301 ggaagtgaca tagcaggaac tactagtacc cttcaggaac aaataggatg gatgacaagt 
     361 aatccaccta ccccagtagg agaaatttat aaaagatgga taatcctggg attaaataaa 
     421 atagtaagaa tgtatagccc taccagcatt ctggacataa gacaagggcc aaaggaaccc 
     481 tttagagatt atgtagatcg gttctataaa actttaagag ccgagcaagc ttcacaggat 
     541 gtaaaaaatt ggatgacaga aaccttgttg gtccaaaatg caaacccaga ttgtaaaacc 
     601 atattaaaag cattgggacc aggagctaca ctagaagaaa tgatgacagc atgtcaggga 
     661 gtagggggac ccagccataa agcaagagtt ttg
//
last modified: Tue May 31 10:56 2022


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