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LOCUS DQ493671 693 bp RNA linear VRL 25-APR-2007
DEFINITION HIV-1 clone 178C from USA gag protein (gag) gene, partial cds
ACCESSION DQ493671
VERSION DQ493671.1 GI:95118187
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 693)
Show all sequences for reference 1
AUTHORS Boritz,E., Rapaport,E.L., Campbell,T.B., Koeppe,J.R. and
Wilson,C.C.
TITLE CD4(+) T cell targeting of human immunodeficiency virus type 1
(HIV-1) peptide sequences present in vivo during chronic,
progressive HIV-1 disease
JOURNAL Virology 361 (1), 34-44 (2007)
PUBMED 17169395
REFERENCE 2 (bases 1 to 693)
Show all sequences for reference 2
AUTHORS Boritz,E.A., Rapaport,E.L., Campbell,T.B., Koeppe,J.R. and
Wilson,C.C.
TITLE Direct Submission
JOURNAL Submitted (14-APR-2006) Immunology, Medicine, and Microbiology,
University of Colorado Health Sciences Center, 4200 East Ninth
Avenue, Denver, CO 80262, USA
FEATURES Location/Qualifiers
source 1..693
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="subject UH178 p24 coding sequence C"
/isolation_source="plasma"
/db_xref="taxon:11676"
/clone="178C"
/country="USA"
gene <1..>693
/gene="gag"
CDS <1..>693
/gene="gag"
/note="p24 capsid protein"
/codon_start="1"
/transl_table="1"
/product="gag protein"
/protein_id="ABF57101.1"
/db_xref="GI:95118188"
/translation="PIVQNLQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFAALS
EGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVHAGPIAPGQMREPRGS
DIAGTTSTLQEQIGWMTSNPPTPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEP
FRDYVDRFYKTLRAEQASQDVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTAC
QGVGGPSHKARVL"
BASE COUNT 254 a 136 c 166 g 137 t
ORIGIN
1 cctatagtac agaacctcca ggggcaaatg gtacatcagg ccatatcgcc tagaacctta
61 aatgcatggg taaaagtagt agaagagaag gctttcagcc cggaggtaat acccatgttt
121 gcagcattat cagaaggagc caccccacaa gatttaaaca ccatgctaaa cacagtgggg
181 ggacatcagg cagccatgca aatgttaaaa gagaccatca atgaggaagc tgcagaatgg
241 gatagattgc acccagtgca tgcaggacct attgcaccag gtcagatgag agaaccaagg
301 ggaagtgaca tagcaggaac tactagtacc cttcaggaac aaataggatg gatgacaagt
361 aatccaccta ccccagtagg agaaatttat aaaagatgga taatcctggg attaaataaa
421 atagtaagaa tgtatagccc taccagcatt ctggacataa gacaagggcc aaaggaaccc
481 tttagagatt atgtagatcg gttctataaa actttaagag ccgagcaagc ttcacaggat
541 gtaaaaaatt ggatgacaga aaccttgttg gtccaaaatg caaacccaga ttgtaaaacc
601 atattaaaag cattgggacc aggagctaca ctagaagaaa tgatgacagc atgtcaggga
661 gtagggggac ccagccataa agcaagagtt ttg
//
last modified: Tue May 31 10:56 2022