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LOCUS DQ391337 373 bp RNA linear VRL 16-JUN-2006
DEFINITION HIV-1 clone fe4.2 from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION DQ391337
VERSION DQ391337.1 GI:90191804
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 373)
Show all sequences for reference 1
AUTHORS Bailey,J.R., Sedaghat,A.R., Kieffer,T., Brennan,T., Lee,P.K.,
Wind-Rotolo,M., Haggerty,C.M., Kamireddi,A.R., Liu,Y., Lee,J.,
Persaud,D., Gallant,J.E., Cofrancesco,J. Jr.., Quinn,T.C.,
Wilke,C.O., Ray,S.C., Siliciano,J.D., Nettles,R.E. and
Siliciano,R.F.
TITLE Residual Human Immunodeficiency Virus Type 1 Viremia in Some
Patients on Antiretroviral Therapy Is Dominated by a Small Number
of Invariant Clones Rarely Found in Circulating CD4+ T Cells
JOURNAL J. Virol. 80 (13), 6441-6457 (2006)
PUBMED 16775332
REFERENCE 2 (bases 1 to 373)
Show all sequences for reference 2
AUTHORS Bailey,J.R., Sedaghat,A.R., Kieffer,T., Brennan,T., Kwon,P.,
Wind-Rotolo,M., Haggerty,C.M., Kamireddi,A.R., Liu,Y., Li,J.,
Persaud,D., Gallant,J.E., Cofrancesco,J. Jr.., Quinn,T.C.,
Wilke,C.O., Ray,S.C., Siliciano,J.D. and Nettles,R.E.
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2006) Medicine, Johns Hopkins University School
of Medicine, 733 N Broadway, Baltimore, MD 21205, USA
REFERENCE 3
Show all sequences for reference 3
AUTHORS Wang,Z., Gurule,E.E., Brennan,T.P., Gerold,J.M., Kwon,K.J.,
Hosmane,N.N., Kumar,M.R., Beg,S.A., Capoferri,A.A., Ray,S.C.,
Ho,Y.-C., Hill,A.L., Siliciano,J.D. and Siliciano,R.F.
TITLE Expanded cellular clones carrying replication-competent HIV-1
persist, wax, and wane.
JOURNAL Proc. Natl. Acad. Sci. U. S. A.. 115(11); E2575-E2584 (2018)
PUBMED 29483265
FEATURES Location/Qualifiers
source 1..373
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolation_source="subject 154 plasma, time point 38"
/db_xref="taxon:11676"
/clone="fe4.2"
/country="USA"
gene <1..>373
/gene="env"
CDS <1..>373
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABD91631.1"
/db_xref="GI:90191805"
/translation="LNETVIINCTRPNNHTRKRMTMGPGRVYYTTGEIIGDIRKAHCN
LTRANWTETLKRIAIKLGEQFNKTFNQSSGGDPEIAMISFNCGGEFFYCNSSQLFNST
ITLPCRIKQIINMWQGVGKAMY"
BASE COUNT 156 a 55 c 72 g 90 t
ORIGIN
1 ctgaatgaaa ctgtaatcat aaattgtaca agacccaaca accatacaag aaaaaggatg
61 actatgggac caggcagagt atattataca acaggagaaa taataggaga tataagaaaa
121 gcacattgta acctgactag agcaaattgg actgagactt taaaaaggat agctataaaa
181 ttaggagaac aatttaataa aacatttaac caatcctcag gaggggaccc agaaattgca
241 atgatcagtt ttaattgtgg aggggaattt ttctattgta attcatcaca actgtttaat
301 agtactatca cactcccatg cagaataaaa caaattataa acatgtggca gggagtagga
361 aaagcaatgt atg
//
last modified: Tue May 31 10:56 2022