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LOCUS DQ375325 824 bp RNA linear VRL 29-MAY-2007
DEFINITION HIV-1 isolate J11458 from Saudi Arabia gag protein (gag) gene,
partial cds
ACCESSION DQ375325
VERSION DQ375325.1 GI:87242099
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 824)
Show all sequences for reference 1
AUTHORS Badreddine,S., Smith,K., van Zyl,H., Bodelle,P., Yamaguchi,J.,
Swanson,P., Devare,S.G. and Brennan,C.A.
TITLE Identification and characterization of HIV type 1 subtypes present
in the Kingdom of Saudi Arabia: high level of genetic diversity
found
JOURNAL AIDS Res. Hum. Retroviruses 23 (5), 667-674 (2007)
PUBMED 17530991
REFERENCE 2 (bases 1 to 824)
Show all sequences for reference 2
AUTHORS Badreddine,S., Smith,K., Zyl,H., Bodelle,P., Yamaguchi,J.,
Devare,S. and Brennan,C.
TITLE Direct Submission
JOURNAL Submitted (24-JAN-2006) 09NG, Abbott Laboratories, 100 Abbott Park
Rd., Abbott Park, IL 60064-6015, USA
FEATURES Location/Qualifiers
source 1..824
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="J11458"
/isolation_source="plasma"
/host="Homo sapiens"
/db_xref="taxon:11676"
/country="Saudi Arabia"
gene <1..>824
/gene="gag"
CDS <1..>824
/gene="gag"
/codon_start="2"
/transl_table="1"
/product="gag protein"
/protein_id="ABD33608.2"
/db_xref="GI:124362368"
/translation="ALDKIEEEQNKCQAKTQKAEAADKGKVSQNYPIVQNIQGQMVHQ
PISPRTLNAWVKVIEEKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKD
TINEEAJEWDRVHPVHAGPAAPGQMREPRGSDIAGTTSTLQEQIAWMTGNPPVPVGDI
YKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFFKTLRAEQASQEVKTWMTD
TLLVQNANPDCKTILRALGPGASLEEMMTACQGVGGPGHKARVLAEAMSQVNSPNI"
BASE COUNT 306 a 155 c 199 g 161 t 3 other
ORIGIN
1 agcattagat aagatagagg aagaacaaaa caaatgtcag gcaaaaacac agaaggcaga
61 agcagctgac aaaggaaagg tcagtcaaaa ttatcctata gtgcagaaca tccaagggca
121 aatggtacac caacctatat cacctagaac tttgaatgca tgggtaaaag taatagagga
181 gaaggctttc agtccagagg taatacccat gtttactgca ctatcagaag gagccacccc
241 acaagatcta aacaccatgt taaatacagt ggggggacat caagcagcca tgcaaatgct
301 aaaagatacc atcaatgagg aggctmtaga atgggatagg gtacatccag tacatgcagg
361 gccagcrgca cccggccaaa tgagagaacc aaggggaagt gacatagcag gaactactag
421 tacccttcag gaacaaatag catggatgac aggtaaccca cctgttccag tgggagacat
481 ttataaaaga tggataattc tgggattaaa taaaatagta aggatgtata gycctgtcag
541 cattttggac ataagacaag gaccaaagga accctttaga gactatgtag atcggttctt
601 taaaacttta agagctgaac aagcttcaca agaggtaaaa acttggatga cagacacctt
661 gttggtccaa aatgcgaacc cagattgtaa gaccatttta agggcattag gaccaggggc
721 ttcattagaa gaaatgatga cagcatgcca gggagtggga ggacctggtc acaaagcaag
781 ggttttggct gaggcaatga gccaagtaaa cagtccaaac ataa
//
last modified: Tue May 31 10:56 2022