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LOCUS DQ370383 388 bp RNA linear VRL 11-AUG-2006
DEFINITION Simian immunodeficiency virus isolate SIVcpzEK519 envelope
glycoprotein (env) gene, partial cds
ACCESSION DQ370383
VERSION DQ370383.1 GI:87137424
KEYWORDS .
SOURCE Simian immunodeficiency virus
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 388)
Show all sequences for reference 1
AUTHORS Keele,B.F., Van Heuverswyn,F., Li,Y., Bailes,E., Takehisa,J.,
Santiago,M.L., Bibollet-Ruche,F., Chen,Y., Wain,L.V., Liegeois,F.,
Loul,S., Ngole,E.M., Bienvenue,Y., Delaporte,E., Brookfield,J.F.,
Sharp,P.M., Shaw,G.M., Peeters,M. and Hahn,B.H.
TITLE Chimpanzee reservoirs of pandemic and nonpandemic HIV-1
JOURNAL Science 313 (5786), 523-526 (2006)
PUBMED 16728595
REFERENCE 2 (bases 1 to 388)
Show all sequences for reference 2
AUTHORS Keele,B.F., Van Heuverswyn,F., Li,Y., Bailes,E., Takehisa,J.,
Santiago,M.L., Bibollet-Ruche,F., Chen,Y., Liegeois,F., Loul,S.,
Mpoudi Ngole,E., Bienvenue,Y., Delaporte,E., Brookfield,J.F.Y.,
Sharp,P.M., Shaw,G.M., Peeters,M. and Hahn,B.H.
TITLE Direct Submission
JOURNAL Submitted (20-JAN-2006) Departments of Medicine and Micobiology,
University of Alabama at Birmingham, 720 South 20th Street, KAUL
816, Birmingham, AL 35294, USA
FEATURES Location/Qualifiers
source 1..388
/organism="Simian immunodeficiency virus"
/mol_type="genomic RNA"
/isolate="SIVcpzEK519"
/isolation_source="fecal matter from wild Pan troglodytes
troglodytes"
/db_xref="taxon:11723"
/country="Cameroon"
gene <1..>388
/gene="env"
/gene_synonym="gp41"
CDS <1..>388
/gene="env"
/gene_synonym="gp41"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABD27928.1"
/db_xref="GI:87137425"
/translation="NNLLRAIEAQQHLLQLSVWGIKQLQARVLAIERYLRDQQILGLW
GCSGKSVCYTNVPWNTTWSNNNSYDTIWGNMTWQNWDTQVRNYSGVIFGLLEQAQEQQ
SINEKSLLELDQWSSLWNWFDITKWLW"
BASE COUNT 129 a 72 c 94 g 93 t
ORIGIN
1 gaataatctg ctgagagcaa tagaggcgca acaacacttg ctgcaactct cagtttgggg
61 cattaaacag ctccaagcaa gagtccttgc tatagaaaga tacctgaggg accagcaaat
121 cctaggccta tggggctgct caggaaaatc tgtgtgttac accaatgtgc cttggaatac
181 cacttggagc aacaataact cttatgacac aatatgggga aatatgacat ggcaaaattg
241 ggatacgcaa gtaagaaatt attcaggtgt catttttggg ctgctagagc aagcacaaga
301 gcaacaaagc ataaatgaaa agtcactctt ggaattggat caatggtcaa gtttgtggaa
361 ctggtttgac attacaaaat ggctgtgg
//
last modified: Tue May 31 10:56 2022