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LOCUS	    DQ370370		     388 bp    RNA     linear	VRL 11-AUG-2006
DEFINITION  Simian immunodeficiency virus isolate SIVcpzMT115 envelope
	    glycoprotein (env) gene, partial cds
ACCESSION   DQ370370
VERSION     DQ370370.1 GI:87137398
KEYWORDS    .
SOURCE	    Simian immunodeficiency virus
  ORGANISM  Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 388)
            Show all sequences for reference 1
  AUTHORS   Keele,B.F., Van Heuverswyn,F., Li,Y., Bailes,E., Takehisa,J.,
	    Santiago,M.L., Bibollet-Ruche,F., Chen,Y., Wain,L.V., Liegeois,F.,
	    Loul,S., Ngole,E.M., Bienvenue,Y., Delaporte,E., Brookfield,J.F.,
	    Sharp,P.M., Shaw,G.M., Peeters,M. and Hahn,B.H.
  TITLE     Chimpanzee reservoirs of pandemic and nonpandemic HIV-1
  JOURNAL   Science 313 (5786), 523-526 (2006)
  PUBMED    16728595
REFERENCE   2 (bases 1 to 388)
            Show all sequences for reference 2
  AUTHORS   Keele,B.F., Van Heuverswyn,F., Li,Y., Bailes,E., Takehisa,J.,
	    Santiago,M.L., Bibollet-Ruche,F., Chen,Y., Liegeois,F., Loul,S.,
	    Mpoudi Ngole,E., Bienvenue,Y., Delaporte,E., Brookfield,J.F.Y.,
	    Sharp,P.M., Shaw,G.M., Peeters,M. and Hahn,B.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (20-JAN-2006) Departments of Medicine and Micobiology,
	    University of Alabama at Birmingham, 720 South 20th Street, KAUL
	    816, Birmingham, AL 35294, USA
FEATURES             Location/Qualifiers
     source	     1..388
		     /organism="Simian immunodeficiency virus"
		     /mol_type="genomic RNA"
		     /isolate="SIVcpzMT115"
		     /isolation_source="fecal matter from wild Pan troglodytes
		     troglodytes"
		     /db_xref="taxon:11723"
		     /country="Cameroon"
     gene	     <1..>388
		     /gene="env"
		     /gene_synonym="gp41"
     CDS	     <1..>388
		     /gene="env"
		     /gene_synonym="gp41"
		     /codon_start="2"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABD27915.1"
		     /db_xref="GI:87137399"
		     /translation="NNLLRAIEAQQHLLQLSVWGIKQLQARVLAVERYLRDQQLLGLW
		     GCTGKTICPTAVHWNKTWGNISNYQDIWNNYTWQDWDKKVNNYTGLIYTLLEEANTQQ
		     EQNEKELLELDSWANLWSWFDITKWLW"
BASE COUNT	140 a	  68 c	   89 g     91 t
ORIGIN
       1 gaataatctg ctaagagcaa tagaagctca acaacatctg ttgcagcttt cagtctgggg 
      61 aattaaacaa ctccaggcaa gagttcttgc tgtggaaagg tacctaagag atcaacaact 
     121 cctgggtcta tggggctgca caggaaaaac tatttgtccc actgctgtac actggaataa 
     181 gacatgggga aatattagca actatcagga catctggaat aattacacat ggcaagactg 
     241 ggataaaaaa gtaaataatt acacaggact catctacaca ctgctagaag aggctaatac 
     301 acagcaagag caaaatgaaa aagagttatt ggaattggat tcatgggcta atctatggag 
     361 ctggtttgac ataacaaaat ggttgtgg
//
last modified: Tue May 31 10:56 2022


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