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LOCUS DQ370370 388 bp RNA linear VRL 11-AUG-2006
DEFINITION Simian immunodeficiency virus isolate SIVcpzMT115 envelope
glycoprotein (env) gene, partial cds
ACCESSION DQ370370
VERSION DQ370370.1 GI:87137398
KEYWORDS .
SOURCE Simian immunodeficiency virus
ORGANISM Simian immunodeficiency virus Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 388)
Show all sequences for reference 1
AUTHORS Keele,B.F., Van Heuverswyn,F., Li,Y., Bailes,E., Takehisa,J.,
Santiago,M.L., Bibollet-Ruche,F., Chen,Y., Wain,L.V., Liegeois,F.,
Loul,S., Ngole,E.M., Bienvenue,Y., Delaporte,E., Brookfield,J.F.,
Sharp,P.M., Shaw,G.M., Peeters,M. and Hahn,B.H.
TITLE Chimpanzee reservoirs of pandemic and nonpandemic HIV-1
JOURNAL Science 313 (5786), 523-526 (2006)
PUBMED 16728595
REFERENCE 2 (bases 1 to 388)
Show all sequences for reference 2
AUTHORS Keele,B.F., Van Heuverswyn,F., Li,Y., Bailes,E., Takehisa,J.,
Santiago,M.L., Bibollet-Ruche,F., Chen,Y., Liegeois,F., Loul,S.,
Mpoudi Ngole,E., Bienvenue,Y., Delaporte,E., Brookfield,J.F.Y.,
Sharp,P.M., Shaw,G.M., Peeters,M. and Hahn,B.H.
TITLE Direct Submission
JOURNAL Submitted (20-JAN-2006) Departments of Medicine and Micobiology,
University of Alabama at Birmingham, 720 South 20th Street, KAUL
816, Birmingham, AL 35294, USA
FEATURES Location/Qualifiers
source 1..388
/organism="Simian immunodeficiency virus"
/mol_type="genomic RNA"
/isolate="SIVcpzMT115"
/isolation_source="fecal matter from wild Pan troglodytes
troglodytes"
/db_xref="taxon:11723"
/country="Cameroon"
gene <1..>388
/gene="env"
/gene_synonym="gp41"
CDS <1..>388
/gene="env"
/gene_synonym="gp41"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABD27915.1"
/db_xref="GI:87137399"
/translation="NNLLRAIEAQQHLLQLSVWGIKQLQARVLAVERYLRDQQLLGLW
GCTGKTICPTAVHWNKTWGNISNYQDIWNNYTWQDWDKKVNNYTGLIYTLLEEANTQQ
EQNEKELLELDSWANLWSWFDITKWLW"
BASE COUNT 140 a 68 c 89 g 91 t
ORIGIN
1 gaataatctg ctaagagcaa tagaagctca acaacatctg ttgcagcttt cagtctgggg
61 aattaaacaa ctccaggcaa gagttcttgc tgtggaaagg tacctaagag atcaacaact
121 cctgggtcta tggggctgca caggaaaaac tatttgtccc actgctgtac actggaataa
181 gacatgggga aatattagca actatcagga catctggaat aattacacat ggcaagactg
241 ggataaaaaa gtaaataatt acacaggact catctacaca ctgctagaag aggctaatac
301 acagcaagag caaaatgaaa aagagttatt ggaattggat tcatgggcta atctatggag
361 ctggtttgac ataacaaaat ggttgtgg
//
last modified: Tue May 31 10:56 2022