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LOCUS DQ360183 408 bp DNA linear VRL 28-FEB-2006
DEFINITION HIV-1 isolate 3202eMa00 from Malawi envelope glycoprotein (env)
gene, partial cds
ACCESSION DQ360183
VERSION DQ360183.1 GI:88698363
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 408)
Show all sequences for reference 1
AUTHORS McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
Fine,P.E.
TITLE Emergence of a Three Codon Deletion in gag p17 in HIV Type 1
Subtype C Long-Term Survivors, and General Population Spread
JOURNAL AIDS Res. Hum. Retroviruses 22 (2), 195-201 (2006)
PUBMED 16478403
REFERENCE 2 (bases 1 to 408)
Show all sequences for reference 2
AUTHORS McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
Fine,P.E.M.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2006) Zoology, National University of Ireland
Galway, University Rd., Galway, Ireland
FEATURES Location/Qualifiers
source 1..408
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="3202eMa00"
/db_xref="taxon:11676"
/country="Malawi"
/note="subtype: C"
gene <1..>408
/gene="env"
CDS <1..>408
/gene="env"
/note="C2V3 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABD49025.1"
/db_xref="GI:88698364"
/translation="HYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTXL
LLNGSLAEKEIIIRSENLTBNAKTIIVHLNESVEIVCARPNNNTRKSMRIGPGQTFYA
TGEIIGNIRQAHCNISETQWNKTLQMVSEKLKEH"
BASE COUNT 176 a 55 c 73 g 100 t 4 other
ORIGIN
1 cattattgtg ctccagctgg ttatgcgatt ctaaagtgta ataataagac attcaatgga
61 acaggaccat gcaataatgt yagcacagta caatgtacac atggaattaa gccagtggta
121 tcaactyaac tactgttaaa tggtagttta gcagaaaaag agataataat tagatctgaa
181 aatctgacar acaatgctaa aacaataata gtacatctta atgaatctgt agaaattgtr
241 tgtgcaagac ccaacaataa tacaagaaaa agtatgagga taggaccagg acaaacattt
301 tatgcaacag gagaaataat aggaaatata agacaagcac attgtaatat tagtgaaact
361 caatggaata aaactttaca aatggtaagt gaaaaattaa aggaacac
//
last modified: Tue May 31 10:56 2022