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LOCUS DQ360168 399 bp DNA linear VRL 28-FEB-2006
DEFINITION HIV-1 isolate 2977eMa99 from Malawi envelope glycoprotein (env)
gene, partial cds
ACCESSION DQ360168
VERSION DQ360168.1 GI:88698333
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 399)
Show all sequences for reference 1
AUTHORS McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
Fine,P.E.
TITLE Emergence of a Three Codon Deletion in gag p17 in HIV Type 1
Subtype C Long-Term Survivors, and General Population Spread
JOURNAL AIDS Res. Hum. Retroviruses 22 (2), 195-201 (2006)
PUBMED 16478403
REFERENCE 2 (bases 1 to 399)
Show all sequences for reference 2
AUTHORS McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
Fine,P.E.M.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2006) Zoology, National University of Ireland
Galway, University Rd., Galway, Ireland
FEATURES Location/Qualifiers
source 1..399
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="2977eMa99"
/db_xref="taxon:11676"
/country="Malawi"
/note="subtype: C"
gene <1..>399
/gene="env"
CDS <1..>399
/gene="env"
/note="C2V3 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABD49010.1"
/db_xref="GI:88698334"
/translation="HYCAPAGYAILKCNNKXFNGTGXCNNVSTVQCTHGIKPVVSTQL
LLNGSLAEEEIIIRSENLTNNAKTIIVHFNESVKITCXRPNNNTRKSVRIGPGQTFYA
TXDIIGDIRQAHCNISKGDWNKTLERVSKTL"
BASE COUNT 163 a 57 c 77 g 96 t 6 other
ORIGIN
1 cattattgtg ctccagctgg ttatgcgatt ctaaagtgta ataataagrc attcaatgga
61 acaggaycat gtaataatgt cagcacagta caatgtacac atggaattaa gccagtggta
121 tcaactcaac tactgttaaa tggtagtcta gcagaagaag agataataat tagatctgaa
181 aatctgacaa acaatgccaa aacaataata gtacatttta atgaatctgt aaaaattacg
241 tgtayaaggc ccaacaataa tacaaggaaa agtgtgagga taggaccagg acaaacattc
301 tatgcaacan nagacataat aggagatatt agacaagcac attgtaacat tagtaaaggg
361 gactggaata aaactttaga gagggtaagt aaaaccttr
//
last modified: Tue May 31 10:56 2022