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LOCUS	    DQ360165		     408 bp    DNA     linear	VRL 28-FEB-2006
DEFINITION  HIV-1 isolate 2917eMa98 from Malawi envelope glycoprotein (env)
	    gene, partial cds
ACCESSION   DQ360165
VERSION     DQ360165.1 GI:88698327
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 408)
            Show all sequences for reference 1
  AUTHORS   McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
	    Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
	    Fine,P.E.
  TITLE     Emergence of a Three Codon Deletion in gag p17 in HIV Type 1
	    Subtype C Long-Term Survivors, and General Population Spread
  JOURNAL   AIDS Res. Hum. Retroviruses 22 (2), 195-201 (2006)
  PUBMED    16478403
REFERENCE   2 (bases 1 to 408)
            Show all sequences for reference 2
  AUTHORS   McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
	    Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
	    Fine,P.E.M.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JAN-2006) Zoology, National University of Ireland
	    Galway, University Rd., Galway, Ireland
FEATURES             Location/Qualifiers
     source	     1..408
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="2917eMa98"
		     /db_xref="taxon:11676"
		     /country="Malawi"
		     /note="subtype: C"
     gene	     <1..>408
		     /gene="env"
     CDS	     <1..>408
		     /gene="env"
		     /note="C2V3 region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABD49007.1"
		     /db_xref="GI:88698328"
		     /translation="HYCAPAGYAILKCNNKTFNGTGPCSNVSTVQCTHGIKPVVSTQL
		     LLNGSLAEEKIIIRSENLTDNVKTIIVHLNESVEITCTRPGNNTRKSIRIGPGQTFYA
		     TGDIIGDIRQAHCNISKEKWNKTLDKVKKELQEH"
BASE COUNT	177 a	  58 c	   77 g     96 t
ORIGIN
       1 cattattgtg ctccagctgg ttatgcgatt ctaaagtgta ataataagac attcaatgga 
      61 acaggaccat gtagtaatgt cagcacagta caatgtacac atggaattaa gccagtggta 
     121 tcaactcaat tactgttaaa tggtagtcta gcagaagaaa agataataat cagatctgaa 
     181 aatctgacag acaatgtcaa aacaataata gtacatctta atgaatctgt agaaattacg 
     241 tgtacaagac ccggcaataa tacaagaaaa agtataagga taggaccagg acaaacattc 
     301 tatgcaacag gagatataat aggagatata agacaagcac attgtaacat tagtaaagag 
     361 aaatggaata aaactttaga taaggtaaag aaagaattac aagaacac
//
last modified: Tue May 31 10:56 2022


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