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LOCUS DQ360165 408 bp DNA linear VRL 28-FEB-2006
DEFINITION HIV-1 isolate 2917eMa98 from Malawi envelope glycoprotein (env)
gene, partial cds
ACCESSION DQ360165
VERSION DQ360165.1 GI:88698327
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 408)
Show all sequences for reference 1
AUTHORS McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
Fine,P.E.
TITLE Emergence of a Three Codon Deletion in gag p17 in HIV Type 1
Subtype C Long-Term Survivors, and General Population Spread
JOURNAL AIDS Res. Hum. Retroviruses 22 (2), 195-201 (2006)
PUBMED 16478403
REFERENCE 2 (bases 1 to 408)
Show all sequences for reference 2
AUTHORS McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
Fine,P.E.M.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2006) Zoology, National University of Ireland
Galway, University Rd., Galway, Ireland
FEATURES Location/Qualifiers
source 1..408
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="2917eMa98"
/db_xref="taxon:11676"
/country="Malawi"
/note="subtype: C"
gene <1..>408
/gene="env"
CDS <1..>408
/gene="env"
/note="C2V3 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABD49007.1"
/db_xref="GI:88698328"
/translation="HYCAPAGYAILKCNNKTFNGTGPCSNVSTVQCTHGIKPVVSTQL
LLNGSLAEEKIIIRSENLTDNVKTIIVHLNESVEITCTRPGNNTRKSIRIGPGQTFYA
TGDIIGDIRQAHCNISKEKWNKTLDKVKKELQEH"
BASE COUNT 177 a 58 c 77 g 96 t
ORIGIN
1 cattattgtg ctccagctgg ttatgcgatt ctaaagtgta ataataagac attcaatgga
61 acaggaccat gtagtaatgt cagcacagta caatgtacac atggaattaa gccagtggta
121 tcaactcaat tactgttaaa tggtagtcta gcagaagaaa agataataat cagatctgaa
181 aatctgacag acaatgtcaa aacaataata gtacatctta atgaatctgt agaaattacg
241 tgtacaagac ccggcaataa tacaagaaaa agtataagga taggaccagg acaaacattc
301 tatgcaacag gagatataat aggagatata agacaagcac attgtaacat tagtaaagag
361 aaatggaata aaactttaga taaggtaaag aaagaattac aagaacac
//
last modified: Tue May 31 10:56 2022