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LOCUS DQ360149 408 bp DNA linear VRL 28-FEB-2006
DEFINITION HIV-1 isolate 2436eMa98 from Malawi envelope glycoprotein (env)
gene, partial cds
ACCESSION DQ360149
VERSION DQ360149.1 GI:88698295
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 408)
Show all sequences for reference 1
AUTHORS McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
Fine,P.E.
TITLE Emergence of a Three Codon Deletion in gag p17 in HIV Type 1
Subtype C Long-Term Survivors, and General Population Spread
JOURNAL AIDS Res. Hum. Retroviruses 22 (2), 195-201 (2006)
PUBMED 16478403
REFERENCE 2 (bases 1 to 408)
Show all sequences for reference 2
AUTHORS McCormack,G.P., Glynn,J.R., Clewley,J.P., Crampin,A.C.,
Travers,S.A., Redmond,N., Keane,T.M., Sibande,F., Mulawa,D. and
Fine,P.E.M.
TITLE Direct Submission
JOURNAL Submitted (12-JAN-2006) Zoology, National University of Ireland
Galway, University Rd., Galway, Ireland
FEATURES Location/Qualifiers
source 1..408
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="2436eMa98"
/db_xref="taxon:11676"
/country="Malawi"
/note="subtype: C"
gene <1..>408
/gene="env"
CDS <1..>408
/gene="env"
/note="C2V3 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABD48991.1"
/db_xref="GI:88698296"
/translation="HYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQL
LLNGSLAEGEIIIRSKNLTDNAKTIIVHLNKSVEIVCTRPNNNTRKSVRIGPGQTFYA
TGAIIGDIRQAHCNISKNDWNSTLQQVGKKLREH"
BASE COUNT 168 a 65 c 80 g 95 t
ORIGIN
1 cactattgtg ctccagctgg ttatgcaatt ctaaagtgta ataataagac attcaatgga
61 acaggacctt gtaataatgt cagcacagta caatgtacac atggaattaa gccagtggta
121 tcaactcaac tactgttaaa tggtagccta gcagaaggag agataataat tagatctaaa
181 aatctgacag acaatgccaa aacaataata gtacatctta ataaatctgt agaaattgtg
241 tgtacaaggc ccaacaataa tacaaggaaa agtgtgagga taggaccagg acagacattc
301 tatgcaacag gagccataat aggagatata agacaagcac actgtaacat tagtaaaaat
361 gattggaata gtactttaca acaggtaggg aaaaaattac gagaacac
//
last modified: Tue May 31 10:56 2022