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LOCUS	    DQ199587		    1212 bp    RNA     linear	VRL 31-DEC-2005
DEFINITION  HIV-1 isolate 14 from USA pol protein (pol) gene, partial cds
ACCESSION   DQ199587
VERSION     DQ199587.1 GI:77737766
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1212)
            Show all sequences for reference 1
  AUTHORS   Gallant,J.E., Rodriguez,A.E., Weinberg,W.G., Young,B., Berger,D.S.,
	    Lim,M.L., Liao,Q., Ross,L., Johnson,J. and Shaefer,M.S.
  TITLE     Early virologic nonresponse to tenofovir, abacavir, and lamivudine
	    in HIV-infected antiretroviral-naive subjects.
  JOURNAL   J. Infect. Dis.. 192(11); 1921-30 (2005)
  PUBMED    16267763
REFERENCE   2 (bases 1 to 1212)
            Show all sequences for reference 2
  AUTHORS   Ross,L. and Li,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2005) International Clinical Virology,
	    GlaxoSmithKline, RC2 3234, 5 Moore Drive, Research Triangle Park,
	    NC 27709, USA
FEATURES             Location/Qualifiers
     source	     1..1212
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="14"
		     /isolation_source="plasma from antiretroviral-naive
		     subject treated for 12 weeks with a regimen of tenofovir
		     plus abacavir/lamivudine and who met the definition of
		     virologic non-response in the unplanned interim analysis
		     of ESS30009"
		     /db_xref="taxon:11676"
		     /country="USA"
     gene	     <1..>1212
		     /gene="pol"
     CDS	     <1..>1212
		     /gene="pol"
		     /note="contains protease and reverse transcriptase"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="ABB01705.1"
		     /db_xref="GI:77737767"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEDINLPGKWKP
		     KMIGGIGGFIKVRQYDQVQVEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPIS
		     PIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPDNPYNTPVF
		     AIKXKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQASMTKILEPFRKQNPD
		     IVIYQYVDDLYVGSDLEIEQHRXKIEELRXHLXXWGFTTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIELPEKDIWTVNDIQKLVGKLNWASQIYAGIKVRQLCKLLRGTKALTEVV
		     PLTEEAELELAE"
BASE COUNT	473 a	 199 c	  254 g    277 t      9 other
ORIGIN
       1 cctcagatca ctctttggca acgacccctc gtcacaataa arataggggg gcaactaaag 
      61 gaagctctat tagatacagg agcagatgac acagtattag aagacataaa tttaccaggg 
     121 aaatggaaac caaaaatgat aggaggaatt ggaggtttta tcaaagtaag acaatatgat 
     181 caagtacaag tagaaatctg tggacataaa gctataggta cagtattagt aggacctaca 
     241 cctgtcaaca taattggaag aaatctgttg actcagattg gttgcacttt aaattttccc 
     301 attagtccta ttgaaactgt accagtaaaa ttaaagccag gaatggatgg cccaaaagtt 
     361 aagcaatggc cattgacaga ggaaaaaata aaagcattgg tagaaatttg tacagaaatg 
     421 gaaaaggaag gaaaaatttc aaaaattggg cctgacaatc catayaatac tccagtattt 
     481 gctataaaga raaaagacag tactaaatgg agaaaattag tagatttcag agaacttaat 
     541 aagagaactc aagacttctg ggaagttcaa ttaggaatac cacatcccgc aggrctaaaa 
     601 aagaaaaaat cagtaacagt actggatgtg ggtgatgcat atttytcagt tcccctagat 
     661 aaagacttca ggaagtatac tgcattcacc atacctagta taaacaatga gacaccaggg 
     721 attagatacc agtacaatgt gcttccgcaa ggatggaaag gatcaccagc aatattccaa 
     781 gctagcatga caaaaatctt ggagcctttt agaaaacaaa atccagacat agttatctat 
     841 cagtacgtgg atgatttgta tgtaggatct gacttagaaa tagagcagca tagaakaaaa 
     901 atagaggaac tgagagawca tctgttwarg tggggattta ccacaccaga caaaaaacat 
     961 cagaaagaac ctccatttct ttggatgggt tatgaactcc atcctgataa atggacagta 
    1021 cagccaatag agctgccaga aaaagacatc tggactgtca atgatataca gaagttagtg 
    1081 ggaaaattga attgggcaag tcaaatttat gcagggatta aggtaaggca attatgcaaa 
    1141 ctccttaggg gaaccaaagc actaacagaa gtagtaccac taacagaaga agcagagcta 
    1201 gaattggcag aa
//
last modified: Tue May 31 10:56 2022


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