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LOCUS DQ187098 222 bp DNA linear VRL 31-AUG-2006
DEFINITION HIV-1 isolate BB539.M9M.G38.v1v2 from Kenya envelope glycoprotein
(env) gene, partial cds
ACCESSION DQ187098
VERSION DQ187098.1 GI:80972121
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 222)
Show all sequences for reference 1
AUTHORS Rainwater,S.M.J., Wu,X., Nduati,R., Nedellec,R., Mosier,D.,
John-Stewart,G., Mbori-Ngacha,D. and Overbaugh,J.
TITLE Cloning and characterization of functional subtype A HIV-1 envelope
variants transmitted through breastfeeding.
JOURNAL Curr. HIV. Res.. 5(2); 189-97 (2007)
PUBMED 17346133
REFERENCE 2 (bases 1 to 222)
Show all sequences for reference 2
AUTHORS Rainwater,S.M.J., Wu,X., Nduati,R., John-Stewart,G.,
Mbori-Ngacha,D. and Overbaugh,J.
TITLE Direct Submission
JOURNAL Submitted (30-AUG-2005) Human Biology, Fred Hutchinson Cancer
Research Center, 1100 Fairview Ave N, Seattle, WA 98109, USA
FEATURES Location/Qualifiers
source 1..222
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="BB539.M9M.G38.v1v2"
/db_xref="taxon:11676"
/country="Kenya"
gene <1..>222
/gene="env"
CDS <1..>222
/gene="env"
/note="V1-V2 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABB53006.1"
/db_xref="GI:80972122"
/translation="CVTLNCSNANVNITGNITGVGEDIKNCSFNMTTELRDKKQKVYS
LFYRLDVVQINENQGNSSNNNYSEYRLINC"
BASE COUNT 86 a 29 c 44 g 63 t
ORIGIN
1 tgcgttactt taaattgcag caatgccaat gtcaatatca cgggcaacat cacgggggtt
61 ggggaagaca taaaaaactg ctctttcaat atgaccacag agctaaggga taagaaacag
121 aaggtatatt cactttttta tagacttgat gtagtacaaa ttaatgaaaa tcaaggtaat
181 agtagtaaca ataattatag tgagtataga ttaataaatt gt
//
last modified: Tue May 31 10:56 2022