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LOCUS	    DQ187098		     222 bp    DNA     linear	VRL 31-AUG-2006
DEFINITION  HIV-1 isolate BB539.M9M.G38.v1v2 from Kenya envelope glycoprotein
	    (env) gene, partial cds
ACCESSION   DQ187098
VERSION     DQ187098.1 GI:80972121
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 222)
            Show all sequences for reference 1
  AUTHORS   Rainwater,S.M.J., Wu,X., Nduati,R., Nedellec,R., Mosier,D.,
	    John-Stewart,G., Mbori-Ngacha,D. and Overbaugh,J.
  TITLE     Cloning and characterization of functional subtype A HIV-1 envelope
	    variants transmitted through breastfeeding.
  JOURNAL   Curr. HIV. Res.. 5(2); 189-97 (2007)
  PUBMED    17346133
REFERENCE   2 (bases 1 to 222)
            Show all sequences for reference 2
  AUTHORS   Rainwater,S.M.J., Wu,X., Nduati,R., John-Stewart,G.,
	    Mbori-Ngacha,D. and Overbaugh,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-AUG-2005) Human Biology, Fred Hutchinson Cancer
	    Research Center, 1100 Fairview Ave N, Seattle, WA 98109, USA
FEATURES             Location/Qualifiers
     source	     1..222
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="BB539.M9M.G38.v1v2"
		     /db_xref="taxon:11676"
		     /country="Kenya"
     gene	     <1..>222
		     /gene="env"
     CDS	     <1..>222
		     /gene="env"
		     /note="V1-V2 region"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="ABB53006.1"
		     /db_xref="GI:80972122"
		     /translation="CVTLNCSNANVNITGNITGVGEDIKNCSFNMTTELRDKKQKVYS
		     LFYRLDVVQINENQGNSSNNNYSEYRLINC"
BASE COUNT	 86 a	  29 c	   44 g     63 t
ORIGIN
       1 tgcgttactt taaattgcag caatgccaat gtcaatatca cgggcaacat cacgggggtt 
      61 ggggaagaca taaaaaactg ctctttcaat atgaccacag agctaaggga taagaaacag 
     121 aaggtatatt cactttttta tagacttgat gtagtacaaa ttaatgaaaa tcaaggtaat 
     181 agtagtaaca ataattatag tgagtataga ttaataaatt gt
//
last modified: Tue May 31 10:56 2022


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