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LOCUS DQ187053 345 bp DNA linear VRL 31-AUG-2006
DEFINITION HIV-1 isolate BB201.CB.B42.v1v2 from Kenya envelope glycoprotein
(env) gene, partial cds
ACCESSION DQ187053
VERSION DQ187053.1 GI:80972032
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 345)
Show all sequences for reference 1
AUTHORS Rainwater,S.M.J., Wu,X., Nduati,R., Nedellec,R., Mosier,D.,
John-Stewart,G., Mbori-Ngacha,D. and Overbaugh,J.
TITLE Cloning and characterization of functional subtype A HIV-1 envelope
variants transmitted through breastfeeding.
JOURNAL Curr. HIV. Res.. 5(2); 189-97 (2007)
PUBMED 17346133
REFERENCE 2 (bases 1 to 345)
Show all sequences for reference 2
AUTHORS Rainwater,S.M.J., Wu,X., Nduati,R., John-Stewart,G.,
Mbori-Ngacha,D. and Overbaugh,J.
TITLE Direct Submission
JOURNAL Submitted (30-AUG-2005) Human Biology, Fred Hutchinson Cancer
Research Center, 1100 Fairview Ave N, Seattle, WA 98109, USA
FEATURES Location/Qualifiers
source 1..345
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="BB201.CB.B42.v1v2"
/db_xref="taxon:11676"
/country="Kenya"
gene <1..>345
/gene="env"
CDS <1..>345
/gene="env"
/note="V1-V2 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="ABB52962.1"
/db_xref="GI:80972033"
/translation="QSLKPCVKLTPLCVTLECRNITGVNISEGKEEIKNCSFNITTEL
RDKRKKVYSLFYRLDVVQIDEGDKNSTQYRLINCNTSAITQACPKVTFEPIPIHYCAP
AGFAILKCNDKEF"
BASE COUNT 119 a 61 c 70 g 95 t
ORIGIN
1 caaagcctaa agccatgtgt aaagttaacc cctctctgcg ttactttgga gtgtaggaac
61 atcacggggg tcaacatctc tgaaggaaag gaggaaataa aaaactgctc tttcaatata
121 accacagaac tgagggataa gagaaagaaa gtatattcac ttttttatag acttgatgta
181 gtacaaattg atgagggtga taagaacagc actcagtata gattaataaa ttgtaatacc
241 tcagccatta cacaagcttg tccaaaggta acctttgagc caattcccat acattattgt
301 gctccagctg gttttgcgat tctaaagtgt aatgataagg agttc
//
last modified: Tue May 31 10:56 2022