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LOCUS DQ177229 1239 bp DNA linear VRL 27-SEP-2005
DEFINITION HIV-1 isolate VI2676 from Belgium pol polyprotein (pol) gene,
partial cds
ACCESSION DQ177229
VERSION DQ177229.1 GI:74483285
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1239)
Show all sequences for reference 1
AUTHORS Arien,K.K., Troyer,R.M., Gali,Y., Colebunders,R.L., Arts,E.J. and
Vanham,G.
TITLE Replicative fitness of historical and recent HIV-1 isolates
suggests HIV-1 attenuation over time
JOURNAL AIDS 19 (15), 1555-1564 (2005)
PUBMED 16184024
REFERENCE 2 (bases 1 to 1239)
Show all sequences for reference 2
AUTHORS Arien,K.K., Troyer,R.M., Gali,Y., Colebunders,R.L., Arts,E.J. and
Vanham,G.
TITLE Direct Submission
JOURNAL Submitted (23-AUG-2005) Department of Microbiology, HIV and
Retrovirology Research Unit, Institute of Tropical Medicine,
Nationalestraat 155, Antwerp B-2000, Belgium
FEATURES Location/Qualifiers
source 1..1239
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="VI2676"
/db_xref="taxon:11676"
/country="Belgium"
/collection_date="2002"
/note="coreceptor=R5; CD4 count=430; no ARV therapy
subtype: B"
gene <1..>1239
/gene="pol"
CDS <1..>1239
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol polyprotein"
/protein_id="ABA10392.1"
/db_xref="GI:74483286"
/translation="LVTIKIGGQLKEALLDTGADDTVLEEMCLPGRWKPKMIGGIGGF
IKVRQYDQIQIEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKL
KPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDGTK
WRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKEFKKYT
AFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEMVIYQYMDD
LYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFSWMGYELHPDKWTVQPI
VLPDKDSWTVNDIQKLVGKLNWASQIYAGIKVKQLCKLLRGTKALTEVVPLTEEAELE
LAENREILKEPVHGAYYDPSK"
BASE COUNT 492 a 195 c 265 g 287 t
ORIGIN
1 ctcgtcacaa taaagatagg gggacaacta aaggaagctc tattagatac aggagcagat
61 gatacagtat tagaagaaat gtgtttgcca ggaagatgga aaccaaaaat gataggggga
121 attggaggtt ttatcaaagt aagacagtat gatcagatac aaatagaaat ctgtggacat
181 aaagctatag gtacagtatt aataggacct acacctgtca acataattgg aagaaatctg
241 ttgactcaga ttggttgtac tctaaatttt cccattagtc ctattgaaac tgtaccagtg
301 aaattaaagc caggaatgga tggcccaaaa gttaaacaat ggccattgac agaagaaaaa
361 ataaaggcat tagtagaaat ttgtacagaa atggaaaagg aagggaaaat ttcaaaaatt
421 gggcctgaaa acccatacaa tactccagta tttgccataa agaaaaaaga tggtactaaa
481 tggaggaaat tggtagattt cagagaactt aataaaagaa ctcaagactt ctgggaagtt
541 caattaggaa taccacatcc cgcagggtta aaaaagaaaa aatcagtaac agtcctggat
601 gtgggtgatg catatttttc agttccctta gataaagagt ttaagaagta tactgcattt
661 accataccta gtataaacaa tgagacacca ggaattagat atcagtacaa tgtgcttcca
721 cagggatgga aaggatcacc agcaatattc caaagtagca tgacaaaaat cttagagcct
781 tttagaaaac aaaatccaga aatggttatc tatcaataca tggatgattt gtatgtagga
841 tctgacttag aaatagggca gcatagaaca aaaatagagg aactgagaca acatctgttg
901 aagtggggat ttaccacacc agacaaaaaa catcagaaag aacctccatt ctcttggatg
961 ggttatgaac tccatcctga taaatggaca gtacagccta tagtgctgcc agacaaagac
1021 agctggactg tcaatgacat acagaaatta gtgggaaaat tgaattgggc aagtcaaatt
1081 tatgcaggga ttaaagtaaa gcaattatgt aagctcctta ggggaaccaa agcactaaca
1141 gaagtagtac cactgacaga agaagcagag ctggaactag cagaaaacag ggagattcta
1201 aaagaaccag tacatggagc gtattatgac ccatcaaaa
//
last modified: Tue May 31 10:56 2022