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LOCUS	    DQ136328		     753 bp    DNA     linear	VRL 25-MAY-2006
DEFINITION  HIV-1 isolate QC168 clone B from Kenya nonfunctional envelope
	    glycoprotein (env) gene, partial sequence
ACCESSION   DQ136328
VERSION     DQ136328.1 GI:73334820
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 753)
            Show all sequences for reference 1
  AUTHORS   Sagar,M., Kirkegaard,E., Lavreys,L. and Overbaugh,J.
  TITLE     Diversity in HIV-1 Envelope V1-V3 Sequences Early in Infection
	    Reflects Sequence Diversity Throughout the HIV-1 Genome But Does
	    Not Predict the Extent of Sequence Diversity During Chronic
	    Infection
  JOURNAL   AIDS Res. Hum. Retroviruses 22 (5), 430-437 (2006)
  PUBMED    16706620
REFERENCE   2 (bases 1 to 753)
            Show all sequences for reference 2
  AUTHORS   Sagar,M., Kirkegaard,E., Lavreys,L. and Overbaugh,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (19-JUL-2005) Division of Human Biology, Fred Hutchinson
	    Cancer Research Center, 1100 Fairview Avenue North C3-168, Seattle,
	    WA 98109, USA
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Sagar,M., Wu,X., Lee,S. and Overbaugh,J.
  TITLE     Human immunodeficiency virus type 1 V1-V2 envelope loop sequences
	    expand and add glycosylation sites over the course of infection,
	    and these modifications affect antibody neutralization sensitivity.
  JOURNAL   J. Virol. 80 (19), 9586-98 (2006)
  PUBMED    16973562
FEATURES             Location/Qualifiers
     source	     1..753
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="QC168"
		     /isolation_source="peripheral blood monomuclear cells 950
		     days after infection"
		     /db_xref="taxon:11676"
		     /clone="B"
		     /country="Kenya"
     gene	     <1..>753
		     /gene="env"
     misc_feature    <1..>753
		     /gene="env"
		     /note="nonfunctional envelope glycoprotein due to
		     mutation"
BASE COUNT	291 a	 138 c	  142 g    182 t
ORIGIN
       1 gcctaaagcc atgtgtaaag ttaacccctc tctgcgttac tttaattgta ccaatgtgaa 
      61 caacaacact accaatgtga acaacaacac ggggtgggac gaagaaagaa aaaactgctc 
     121 tttcaatgta accacagagc taagggataa gagacagaag gtatattcac ttttttataa 
     181 acttgatgta gtacaaattg ataatagtag ttatagatta ataaattgta atacctcagc 
     241 cattacacag gcttgcccaa aggtaacctt tgagccaatt cccatacatt attgtgcccc 
     301 agctggtttt gcgatcctaa aatgtaagga tgagaagttc aatggaacag ggccatgcaa 
     361 gaatgtcagc acagtacaat gcacacatgg aatcaagcca gtagtatcaa ctcaactgct 
     421 gttaaatggc agtctagcag aaaaagaggt aatgattaga tctgaaaatt tcacaaacaa 
     481 tgccaaaaac atactagtac aatttaaaga gcctgtaaaa attaattgta ccagacctga 
     541 caacaataca agaacaagta tacgtatagg accaggacaa gcattctatg caacaggtat 
     601 aataggggat ataagacaag catattgtac tgtcaatgga tcagaatgga ataaagcgtt 
     661 acaaaaggta gttgaacaat taagaagctc cttcgagaac aaaacaataa tatttgctaa 
     721 ctcctcagga ggggatctag aaatttacca aca
//
last modified: Tue May 31 10:56 2022


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