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LOCUS DQ076816 978 bp RNA linear VRL 31-MAY-2006
DEFINITION HIV-1 clone E20621 envelope glycoprotein (env) gene, partial cds
ACCESSION DQ076816
VERSION DQ076816.1 GI:73763694
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 978)
Show all sequences for reference 1
AUTHORS Loutfy,M.R., Raboud,J.M., Montaner,J.S.G., Antoniou,T.,
Wynhoven,B., Smaill,F., Rouleau,D., Gill,J., Schlech,W.,
Brumme,Z.L., Mo,T., Gough,K., Rachlis,A., Harrigan,P.R. and
Walmsley,S.L.
TITLE Assay of HIV gp41 amino acid sequence to identify baseline
variation and mutation development in patients with virologic
failure on enfuvirtide.
JOURNAL Antiviral. Res.. 75(1); 58-63 (2007)
PUBMED 17196268
REFERENCE 2 (bases 1 to 978)
Show all sequences for reference 2
AUTHORS Loutfy,M.R., Walmsley,S.L., Raboud,J.M., Montaner,J.S.G.,
Wynhoven,B., Brumme,Z.L., Mo,T., Smaill,F., Rouleau,D., Gill,J.,
Schlech,W., Gough,K., Rachlis,A., Cameron,B., Lapointe,N.,
Trottier,B., Shafran,S. and Harrigan,P.R.
TITLE Direct Submission
JOURNAL Submitted (27-MAY-2005) Research Laboratory, BC Centre for
Excellence in HIV/AIDS, 603-1081 Burrard Street, Vancouver, British
Columbia V6Z 1Y6, Canada
FEATURES Location/Qualifiers
source 1..978
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/db_xref="taxon:11676"
/clone="E20621"
gene <1..>978
/gene="env"
CDS <1..>978
/gene="env"
/note="gp41"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAZ84222.1"
/db_xref="GI:73763695"
/translation="AVGVGAMFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNNM
LRAIEAQQHMLQLTVWGIXQLQARVLAVXRYLKXXQLLGXWGXSXXLICTAXVPWNXS
WSSXNMTXIWEXMTWMQWEXEIDNYTXLIYTLIEESQNQQEKNEQELLELDKWASLWN
WFNISQWLWYIKIFIMIVGGLIGLRIXFTVLSIVNRVRQGYSPLSFQTRFPVQRGPDR
PEGIEEEGGEQDRDRSGPLVNGFLALFWVDLRXLCLFXYHRLRDLLLILARIVELLGR
RGWGILKYWWNLLQYWSQELKKSAVXLFDVTAIAVAEGTDRIIEVLQRIF"
BASE COUNT 281 a 173 c 257 g 238 t 29 other
ORIGIN
1 gcagtgggag taggagctat gttccttggg ttcttgggag cagcaggaag cactatgggc
61 gcagcgtcac tgacgctgac ggtacaggcc agacaattac tgtctggtat agtgcaacag
121 cagaacaata tgctgagggc tattgaggcg cagcagcata tgytgcaact cacagtctgg
181 ggcatcmagc agctccaggc magagtcctg gctgtggama gatacctaaa gsatcwacag
241 ctcctggggs tttggggtkg ctctgkaawa ctcatctgca ccgctsctgt gccttggaat
301 wctagttgga gtagtawaaa tatgactkag atttgggaaa raatgacctg gatgcartgg
361 gaaaragaga ttgacaatta cacagratta atatacacct taattgaaga atcgcaraac
421 caacaagaaa agaatgaaca agaattatta gaattagata aatgggcaag tttgtggaat
481 tggtttaaca tmtcacaatg gctrtggtat ataaaaatat tcataatgat agtaggaggc
541 ttgataggtt taagaatart ttttactgtg ctttctatag tgaatagagt taggcaggga
601 tactcaccat tatcgttcca gacccgcttc ccagtccaga ggggacccga caggcccgaa
661 ggaatcgaag aagaaggtgg agagcaagac agagacagat ccggkccatt agtgaaygga
721 ttcttagcac ttttttgggt cgacctgcgg arcctgtgcc tcttcmtcta ccaccgcttg
781 agagacttac tcttgattct agcgaggatt gtggaacttc tgggacgcag ggggtgggga
841 atcctcaaat attggtggaa ycttctacag tattggagyc aggagctaaa gaagagtgct
901 gttarcttgt ttgatgtcac agccatagca gtagctgagg ggacagatag gatcatagaa
961 gtattacaaa gaattttt
//
last modified: Tue May 31 10:56 2022