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LOCUS	    DQ076816		     978 bp    RNA     linear	VRL 31-MAY-2006
DEFINITION  HIV-1 clone E20621 envelope glycoprotein (env) gene, partial cds
ACCESSION   DQ076816
VERSION     DQ076816.1 GI:73763694
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 978)
            Show all sequences for reference 1
  AUTHORS   Loutfy,M.R., Raboud,J.M., Montaner,J.S.G., Antoniou,T.,
	    Wynhoven,B., Smaill,F., Rouleau,D., Gill,J., Schlech,W.,
	    Brumme,Z.L., Mo,T., Gough,K., Rachlis,A., Harrigan,P.R. and
	    Walmsley,S.L.
  TITLE     Assay of HIV gp41 amino acid sequence to identify baseline
	    variation and mutation development in patients with virologic
	    failure on enfuvirtide.
  JOURNAL   Antiviral. Res.. 75(1); 58-63 (2007)
  PUBMED    17196268
REFERENCE   2 (bases 1 to 978)
            Show all sequences for reference 2
  AUTHORS   Loutfy,M.R., Walmsley,S.L., Raboud,J.M., Montaner,J.S.G.,
	    Wynhoven,B., Brumme,Z.L., Mo,T., Smaill,F., Rouleau,D., Gill,J.,
	    Schlech,W., Gough,K., Rachlis,A., Cameron,B., Lapointe,N.,
	    Trottier,B., Shafran,S. and Harrigan,P.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAY-2005) Research Laboratory, BC Centre for
	    Excellence in HIV/AIDS, 603-1081 Burrard Street, Vancouver, British
	    Columbia V6Z 1Y6, Canada
FEATURES             Location/Qualifiers
     source	     1..978
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /db_xref="taxon:11676"
		     /clone="E20621"
     gene	     <1..>978
		     /gene="env"
     CDS	     <1..>978
		     /gene="env"
		     /note="gp41"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAZ84222.1"
		     /db_xref="GI:73763695"
		     /translation="AVGVGAMFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNNM
		     LRAIEAQQHMLQLTVWGIXQLQARVLAVXRYLKXXQLLGXWGXSXXLICTAXVPWNXS
		     WSSXNMTXIWEXMTWMQWEXEIDNYTXLIYTLIEESQNQQEKNEQELLELDKWASLWN
		     WFNISQWLWYIKIFIMIVGGLIGLRIXFTVLSIVNRVRQGYSPLSFQTRFPVQRGPDR
		     PEGIEEEGGEQDRDRSGPLVNGFLALFWVDLRXLCLFXYHRLRDLLLILARIVELLGR
		     RGWGILKYWWNLLQYWSQELKKSAVXLFDVTAIAVAEGTDRIIEVLQRIF"
BASE COUNT	281 a	 173 c	  257 g    238 t     29 other
ORIGIN
       1 gcagtgggag taggagctat gttccttggg ttcttgggag cagcaggaag cactatgggc 
      61 gcagcgtcac tgacgctgac ggtacaggcc agacaattac tgtctggtat agtgcaacag 
     121 cagaacaata tgctgagggc tattgaggcg cagcagcata tgytgcaact cacagtctgg 
     181 ggcatcmagc agctccaggc magagtcctg gctgtggama gatacctaaa gsatcwacag 
     241 ctcctggggs tttggggtkg ctctgkaawa ctcatctgca ccgctsctgt gccttggaat 
     301 wctagttgga gtagtawaaa tatgactkag atttgggaaa raatgacctg gatgcartgg 
     361 gaaaragaga ttgacaatta cacagratta atatacacct taattgaaga atcgcaraac 
     421 caacaagaaa agaatgaaca agaattatta gaattagata aatgggcaag tttgtggaat 
     481 tggtttaaca tmtcacaatg gctrtggtat ataaaaatat tcataatgat agtaggaggc 
     541 ttgataggtt taagaatart ttttactgtg ctttctatag tgaatagagt taggcaggga 
     601 tactcaccat tatcgttcca gacccgcttc ccagtccaga ggggacccga caggcccgaa 
     661 ggaatcgaag aagaaggtgg agagcaagac agagacagat ccggkccatt agtgaaygga 
     721 ttcttagcac ttttttgggt cgacctgcgg arcctgtgcc tcttcmtcta ccaccgcttg 
     781 agagacttac tcttgattct agcgaggatt gtggaacttc tgggacgcag ggggtgggga 
     841 atcctcaaat attggtggaa ycttctacag tattggagyc aggagctaaa gaagagtgct 
     901 gttarcttgt ttgatgtcac agccatagca gtagctgagg ggacagatag gatcatagaa 
     961 gtattacaaa gaattttt
//
last modified: Tue May 31 10:56 2022


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