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LOCUS	    DQ076810		     978 bp    RNA     linear	VRL 31-MAY-2006
DEFINITION  HIV-1 clone E20541 envelope glycoprotein (env) gene, partial cds
ACCESSION   DQ076810
VERSION     DQ076810.1 GI:73763682
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 978)
            Show all sequences for reference 1
  AUTHORS   Loutfy,M.R., Raboud,J.M., Montaner,J.S.G., Antoniou,T.,
	    Wynhoven,B., Smaill,F., Rouleau,D., Gill,J., Schlech,W.,
	    Brumme,Z.L., Mo,T., Gough,K., Rachlis,A., Harrigan,P.R. and
	    Walmsley,S.L.
  TITLE     Assay of HIV gp41 amino acid sequence to identify baseline
	    variation and mutation development in patients with virologic
	    failure on enfuvirtide.
  JOURNAL   Antiviral. Res.. 75(1); 58-63 (2007)
  PUBMED    17196268
REFERENCE   2 (bases 1 to 978)
            Show all sequences for reference 2
  AUTHORS   Loutfy,M.R., Walmsley,S.L., Raboud,J.M., Montaner,J.S.G.,
	    Wynhoven,B., Brumme,Z.L., Mo,T., Smaill,F., Rouleau,D., Gill,J.,
	    Schlech,W., Gough,K., Rachlis,A., Cameron,B., Lapointe,N.,
	    Trottier,B., Shafran,S. and Harrigan,P.R.
  TITLE     Direct Submission
  JOURNAL   Submitted (27-MAY-2005) Research Laboratory, BC Centre for
	    Excellence in HIV/AIDS, 603-1081 Burrard Street, Vancouver, British
	    Columbia V6Z 1Y6, Canada
FEATURES             Location/Qualifiers
     source	     1..978
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /db_xref="taxon:11676"
		     /clone="E20541"
     gene	     <1..>978
		     /gene="env"
     CDS	     <1..>978
		     /gene="env"
		     /note="gp41"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAZ84216.1"
		     /db_xref="GI:73763683"
		     /translation="AVGIGAVFLGFLGAAGSTMGAASLTLTVQARLLLSGIVQQQNNL
		     LRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTTVPWNTS
		     WSNKSLDQIWGNMTWMQWEKEIDNYTELIYSLIEESQNQQEKNELELLELDKWASLWN
		     WFDITXWLWYIKIFIMVVGGLIGLRIVFAVLSXVNRVRQGYSPLSFQTHLPVPRGLDR
		     PEGIEEEGGGRDRDRSIRLVDGFLAIIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGR
		     RGWEALKYWWNLLQYWSQELKNSAISLXNATAIAVAEGTDRVIEVAQRIG"
BASE COUNT	288 a	 176 c	  271 g    238 t      5 other
ORIGIN
       1 gcagtgggaa taggagctgt gttccttggg ttcttgggag cagcaggaag cactatgggc 
      61 gcagcgtcgc tgacgctgac ggtacaggcc agactattat tgtctggtat agtgcaacag 
     121 cagaacaatt tgctgagagc tattgaggcg caacagcatc tgttgcaact cacggtctgg 
     181 ggcatcaagc agctccaggc aagagtcctg gctgtagaaa gatacctaag ggatcaacag 
     241 ctcctgggaa tttggggttg ctctggaaaa ctcatctgca ccactactgt gccttggaat 
     301 actagttgga gtaataaatc tctggatcag atttggggta acatgacctg gatgcagtgg 
     361 gaaaaagaaa ttgacaatta cacagaatta atatactcct taattgaaga atcgcagaac 
     421 caacaagaaa agaatgaact agagttattg gaactagata aatgggcaag tttgtggaat 
     481 tggtttgaca taacaarttg gctgtggtat ataaaaatat tcataatggt agtaggaggc 
     541 ttgataggyt taagaatagt ttttgctgtg ctttctrtag tgaatagagt taggcaggga 
     601 tactcaccat tatcgtttca gacccacctc ccagttccga ggggactcga caggcccgaa 
     661 ggaatcgaag aagaaggtgg agggagagac agagacagat ccataagatt agtggatgga 
     721 ttcttggcaa tcatctggga cgatctgcgg agcctgtgcc tcttcagcta ccaccgcttg 
     781 agagacttac tcttgattgt aacgaggatt gtggaacttc tgggacgcag ggggtgggaa 
     841 gccctcaagt attggtggaa tctcctgcag tattggagtc aggaactaaa gaatagtgct 
     901 attagcttgy wcaacgccac agccatagca gtagctgaag gaacagatag ggttatagaa 
     961 gtagcacaaa gaattggt
//
last modified: Tue May 31 10:56 2022


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