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LOCUS DQ076810 978 bp RNA linear VRL 31-MAY-2006
DEFINITION HIV-1 clone E20541 envelope glycoprotein (env) gene, partial cds
ACCESSION DQ076810
VERSION DQ076810.1 GI:73763682
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 978)
Show all sequences for reference 1
AUTHORS Loutfy,M.R., Raboud,J.M., Montaner,J.S.G., Antoniou,T.,
Wynhoven,B., Smaill,F., Rouleau,D., Gill,J., Schlech,W.,
Brumme,Z.L., Mo,T., Gough,K., Rachlis,A., Harrigan,P.R. and
Walmsley,S.L.
TITLE Assay of HIV gp41 amino acid sequence to identify baseline
variation and mutation development in patients with virologic
failure on enfuvirtide.
JOURNAL Antiviral. Res.. 75(1); 58-63 (2007)
PUBMED 17196268
REFERENCE 2 (bases 1 to 978)
Show all sequences for reference 2
AUTHORS Loutfy,M.R., Walmsley,S.L., Raboud,J.M., Montaner,J.S.G.,
Wynhoven,B., Brumme,Z.L., Mo,T., Smaill,F., Rouleau,D., Gill,J.,
Schlech,W., Gough,K., Rachlis,A., Cameron,B., Lapointe,N.,
Trottier,B., Shafran,S. and Harrigan,P.R.
TITLE Direct Submission
JOURNAL Submitted (27-MAY-2005) Research Laboratory, BC Centre for
Excellence in HIV/AIDS, 603-1081 Burrard Street, Vancouver, British
Columbia V6Z 1Y6, Canada
FEATURES Location/Qualifiers
source 1..978
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/db_xref="taxon:11676"
/clone="E20541"
gene <1..>978
/gene="env"
CDS <1..>978
/gene="env"
/note="gp41"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAZ84216.1"
/db_xref="GI:73763683"
/translation="AVGIGAVFLGFLGAAGSTMGAASLTLTVQARLLLSGIVQQQNNL
LRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTTVPWNTS
WSNKSLDQIWGNMTWMQWEKEIDNYTELIYSLIEESQNQQEKNELELLELDKWASLWN
WFDITXWLWYIKIFIMVVGGLIGLRIVFAVLSXVNRVRQGYSPLSFQTHLPVPRGLDR
PEGIEEEGGGRDRDRSIRLVDGFLAIIWDDLRSLCLFSYHRLRDLLLIVTRIVELLGR
RGWEALKYWWNLLQYWSQELKNSAISLXNATAIAVAEGTDRVIEVAQRIG"
BASE COUNT 288 a 176 c 271 g 238 t 5 other
ORIGIN
1 gcagtgggaa taggagctgt gttccttggg ttcttgggag cagcaggaag cactatgggc
61 gcagcgtcgc tgacgctgac ggtacaggcc agactattat tgtctggtat agtgcaacag
121 cagaacaatt tgctgagagc tattgaggcg caacagcatc tgttgcaact cacggtctgg
181 ggcatcaagc agctccaggc aagagtcctg gctgtagaaa gatacctaag ggatcaacag
241 ctcctgggaa tttggggttg ctctggaaaa ctcatctgca ccactactgt gccttggaat
301 actagttgga gtaataaatc tctggatcag atttggggta acatgacctg gatgcagtgg
361 gaaaaagaaa ttgacaatta cacagaatta atatactcct taattgaaga atcgcagaac
421 caacaagaaa agaatgaact agagttattg gaactagata aatgggcaag tttgtggaat
481 tggtttgaca taacaarttg gctgtggtat ataaaaatat tcataatggt agtaggaggc
541 ttgataggyt taagaatagt ttttgctgtg ctttctrtag tgaatagagt taggcaggga
601 tactcaccat tatcgtttca gacccacctc ccagttccga ggggactcga caggcccgaa
661 ggaatcgaag aagaaggtgg agggagagac agagacagat ccataagatt agtggatgga
721 ttcttggcaa tcatctggga cgatctgcgg agcctgtgcc tcttcagcta ccaccgcttg
781 agagacttac tcttgattgt aacgaggatt gtggaacttc tgggacgcag ggggtgggaa
841 gccctcaagt attggtggaa tctcctgcag tattggagtc aggaactaaa gaatagtgct
901 attagcttgy wcaacgccac agccatagca gtagctgaag gaacagatag ggttatagaa
961 gtagcacaaa gaattggt
//
last modified: Tue May 31 10:56 2022