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LOCUS AY669761 2538 bp DNA linear VRL 12-NOV-2004
DEFINITION HIV-1 isolate 93BR020 from Brazil envelope glycoprotein (env) gene,
partial cds
ACCESSION AY669761
VERSION AY669761.1 GI:49617674
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 2538)
Show all sequences for reference 1
AUTHORS Binley,J.M., Wrin,T., Korber,B., Zwick,M.B., Wang,M., Chappey,C.,
Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
Petropoulos,C.J. and Burton,D.R.
TITLE Comprehensive cross-clade neutralization analysis of a panel of
anti-human immunodeficiency virus type 1 monoclonal antibodies.
JOURNAL J. Virol. 78 (23), 13232-52 (2004)
PUBMED 15542675
REFERENCE 2 (bases 1 to 2538)
Show all sequences for reference 2
AUTHORS Binley,J.M., Wrin,T., Zwick,M.B., Korber,B., Wang,M., Chappey,C.,
Stiegler,G., Kunert,R., Zolla-Pazner,S., Katinger,H.,
Petropoulos,C.J. and Burton,D.R.
TITLE Direct Submission
JOURNAL Submitted (29-JUN-2004) Departments of Immunology and Molecular
Biology, The Scripps Research Institute, 10550 North Torrey Pines
Rd., La Jolla, CA 92037, USA
FEATURES Location/Qualifiers
source 1..2538
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="93BR020"
/db_xref="taxon:11676"
/country="Brazil"
/note="genotype: F"
gene 1..2538
/gene="env"
CDS 1..>2538
/gene="env"
/note="gp160"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAT67533.1"
/db_xref="GI:49617675"
/translation="MRVRGMQRNWQHLGKWGLLFLGTLIICNAAENLWVTVYYGVPVW
KEATTTLFCASDAKSYEKEAHNVWATHACVPTDPNPQEVVLENVTEXFNMWXNNMVEQ
MHTDIISLWDQSLKPCVKLTPLCVTLDCXNXXTNGTXDTXXXXDXLKEDPXAIQNCSF
NTTAEIRDKQLKVXALFYKLDIVXINXBDNRTYRLIXCBXSTITQACPKVSWDPIPIH
YCAPAGYAILKCNEKNFTGTGSCKNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIXIRS
QNISDNAKXIIVHLNESVQINCTRPNNNTRKRISLGPGRVFYTTGEIIGDIRKAHCNV
SGTQWXXTLAXVXAXLXXYFPNATIKFNSSSGGDLEITRHNFNCMGEFFYCNTDELFN
DTKFNBTEFNDTITLPCRIKQIVNMWQEVGRAMYANPIAGXITCNSNITGLLLTRDGG
LNSTNETFRPGGGNMKDNWRSELYKYKVVEIEPLGVAPTXAKRQVVKRERRAVGLGAL
FLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQL
QARVLAVERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKSLEEIWGNMTWMEWEKE
VSNYSKEIYRLIEDSQNQQEKNEQELLALDKWASLWNWFDISQWLWYIKIFIMIVGGL
IGLRIVFTVLSIVNRVRKGYSPLSFQTHIPSPREPDRPEGIEEGGGEQGKDRSVRLXX
GFLALAWDDLRNLCLFSYRHLRDFILIAARIVDRGLRRGWEALKYLGXLTQYWGQELK
NSAISLLNATAIAVAEWTDRVIEALQRAGRAXLNIPRRIRQGLERALL"
BASE COUNT 856 a 437 c 592 g 598 t 55 other
ORIGIN
1 atgagagtga gggggatgca gaggaattgg cagcacttgg ggaagtgggg ccttttattc
61 ctggggacat taataatctg taatgctgca gaaaacttat gggttacagt ctattatggg
121 gtacctgtgt ggaaagaagc aaccactact ctattctgtg catcagatgc taaatcatat
181 gaaaaagagg cacataatgt ctgggctaca catgcttgtg tacccacaga tcccaatcca
241 caagaagtag ttctggaaaa tgtaacagaa rrgtttaata tgtggraaaa taacatggta
301 gaacaaatgc atacagatat aatcagttta tgggatcaaa gcctaaagcc atgtgtgaag
361 ttaaccccac tctgtgttac tttagattgt agwaacawtg scaccaatgg cacyawtgac
421 acyawtgmcr yymrwgacas yctgaaggaa gatccakrgg caatacaaaa ctgttctttc
481 aatacaaccg cagaaataag agataagcag ctgaaagtac akgcactttt ttataaactt
541 gatatagtac maatcaacma rratgacaat agaacataca gactaatama ttgtratrcc
601 tcraccatta cacaggcttg tccaaaggta tcttgggatc caattcccat acattattgt
661 gctccagctg gttatgcgat tctaaagtgt aatgagaaaa atttcacagg gacagggtca
721 tgcaagaatg tcagtacagt acaatgtaca catggaatta aaccagtggt atccactcaa
781 ttgttgttaa atggcagcct agcagaagga gagatartaa tcagatctca aaatatctca
841 gataatgcaa aaaycataat agtgcacctt aatgaatctg tacagattaa ttgtacaaga
901 cccaacaaca atacaagaaa aagaatatct ttaggaccag gacgagtatt ttatacaaca
961 ggrgaaataa taggagacat cagaaaggca cattgtaacg ttagtggaac acaatggagk
1021 aamacgttag caarggtaar ggcaargtta rrgwyttatt tccctaatgc aacaataaaa
1081 tttaactcat cctcaggagg ggacctagaa attacaaggc ataattttaa ttgtatggga
1141 gaatttttct actgtaatac agatgaactg tttaatgaca caaaattcaa tracacagaa
1201 ttcaatgaca ctatcactct cccatgtcga ataaaacaaa ttgtaaacat gtggcaggaa
1261 gtgggacgag caatgtatgc caatcccatt gcaggaaama ttacmtgtaa ctcaaatatt
1321 acaggtctgc tattgacaag agatggtggt ctgaatagta ctaatgagac cttcagacct
1381 gggggaggaa atatgaaaga caattggaga agtgaattat ayaaatataa agtagtagaa
1441 attgaaccay taggagtagc acccaccarg gcaaaaagac aagtggtgaa gagagaaaga
1501 agagcagtgg gactaggagc tctgttcctt gggttcttgg gagcagcagg aagcactatg
1561 ggcgcggcgt caataacgct gacggtacag gccagacaat tattgtctgg aatagtgcaa
1621 cagcagagca atctgctgag ggctattgaa gcgcaacagc atctgttgca gctcacagtc
1681 tggggcatta aacagctcca ggcaagagtc ctggctgtgg aaagatacct aaaggatcaa
1741 cagctcctag ggctttgggg ctgctctgga aaactcatct gcaccactaa tgtgccctgg
1801 aactctagtt ggagtaataa atctcttgag gagatttggg ggaacatgac ctggatggag
1861 tgggaaaaag aggttagcaa ttactcaaaa gaaatataca ggttaattga agactcgcag
1921 aaccagcagg aaaagaatga acaagaatta ttagcattgg acaaatgggc aagtctgtgg
1981 aattggtttg acatatcaca atggctgtgg tatataaaaa tattcataat gatagtagga
2041 ggcttgatag gcttaagaat agtttttact gtgctttcta tagtaaatag agttaggaag
2101 ggatactcac ctttgtcatt tcagacccat atcccaagcc cgagggaacc cgacaggccc
2161 gaaggaatcg aagaaggagg tggagagcaa ggcaaagaca gatccgtgag attagygamc
2221 ggwttcttag ctcttgcctg ggacgacctg cggaacctgt gcctcttcag ctaccgccac
2281 ttgagagact tcatattaat tgcagcgagg attgtggaca gggggctgag gagrgggtgg
2341 gaagctctca aatatctggg gartctcaca cagtattggg gtcaggaact aaagaatagy
2401 gctattagct tgcttaatgc cacagcaata gcagtagctg agtggacaga tagagttata
2461 gaagctttgc aaagagctgg tagagctrtt ctcaacatac ctagaagaat aagacagggc
2521 ttggaaaggg ctttgcta
//
last modified: Tue May 31 10:56 2022