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LOCUS AY619813 354 bp DNA linear VRL 02-JUN-2005
DEFINITION HIV-1 isolate C3.X4.ci clone 3 from Sweden envelope glycoprotein
(env) gene, partial cds
ACCESSION AY619813
VERSION AY619813.1 GI:54660274
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 354)
Show all sequences for reference 1
AUTHORS Clevestig,P., Maljkovic,I., Casper,C., Carlenor,E., Lindgren,S.,
Naver,L., Bohlin,A.B., Fenyo,E.M., Leitner,T. and Ehrnst,A.
TITLE The X4 Phenotype of HIV Type 1 Evolves from R5 in Two Children of
Mothers, Carrying X4, and Is Not Linked to Transmission
JOURNAL AIDS Res. Hum. Retroviruses 21 (5), 371-378 (2005)
PUBMED 15929699
REFERENCE 2 (bases 1 to 354)
Show all sequences for reference 2
AUTHORS Clevestig,P., Maljkovic,I., Casper,C., Carlenor,E., Fenyo,E.-M.,
Leitner,T. and Ehrnst,A.
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2004) Microbiology & Tumor Biology Center,
Karolinska Institutet, PO Box 280, Stockholm SE-171 77, Sweden
FEATURES Location/Qualifiers
source 1..354
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/strain="Ca"
/isolate="C3.X4.ci"
/db_xref="taxon:11676"
/clone="3"
/country="Sweden"
/note="mother-child pair A subtype: D"
gene <1..>354
/gene="env"
CDS <1..>354
/gene="env"
/note="V3 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAV37290.1"
/db_xref="GI:54660275"
/translation="VVSTQLLLNGSLAEEEIIIRSENLTNNAKVIIVQLNESVTINCS
RPYTTLRKSTGIGPGRASYIAKIGDIRQAYCNISREGWNRTLHQVAEKLGDLFNRTTI
IFKPSSGGDPEITTHS"
BASE COUNT 138 a 63 c 72 g 81 t
ORIGIN
1 gtagtgtcaa ctcaactgtt gttgaatgga agtctagcag aagaagagat aataatcaga
61 tctgaaaacc tcacaaataa tgctaaagtt ataatagtac agcttaatga gtctgtaaca
121 atcaattgct caaggcccta caccactctc agaaaaagta caggtatagg accggggcga
181 gcatcctata tagcaaagat aggtgatata agacaagcat attgtaacat tagtagggaa
241 ggatggaata gaactttaca ccaggtagct gaaaaattag gagacctttt taacaggaca
301 acaataattt ttaaaccatc ctcaggaggg gacccagaaa ttacaacaca cagc
//
last modified: Tue May 31 10:56 2022