View NCBI entry Download GenBank file Graphics View Download GFF3 File
LOCUS AY619732 357 bp DNA linear VRL 02-JUN-2005
DEFINITION HIV-1 isolate M2.1D clone 1 from Sweden envelope glycoprotein (env)
gene, partial cds
ACCESSION AY619732
VERSION AY619732.1 GI:54660113
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 357)
Show all sequences for reference 1
AUTHORS Clevestig,P., Maljkovic,I., Casper,C., Carlenor,E., Lindgren,S.,
Naver,L., Bohlin,A.B., Fenyo,E.M., Leitner,T. and Ehrnst,A.
TITLE The X4 Phenotype of HIV Type 1 Evolves from R5 in Two Children of
Mothers, Carrying X4, and Is Not Linked to Transmission
JOURNAL AIDS Res. Hum. Retroviruses 21 (5), 371-378 (2005)
PUBMED 15929699
REFERENCE 2 (bases 1 to 357)
Show all sequences for reference 2
AUTHORS Clevestig,P., Maljkovic,I., Casper,C., Carlenor,E., Fenyo,E.-M.,
Leitner,T. and Ehrnst,A.
TITLE Direct Submission
JOURNAL Submitted (07-MAY-2004) Microbiology & Tumor Biology Center,
Karolinska Institutet, PO Box 280, Stockholm SE-171 77, Sweden
FEATURES Location/Qualifiers
source 1..357
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/strain="Ma"
/isolate="M2.1D"
/db_xref="taxon:11676"
/clone="1"
/country="Sweden"
/note="mother-child pair A subtype: D"
gene <1..>357
/gene="env"
CDS <1..>357
/gene="env"
/note="V3 region"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAV37210.1"
/db_xref="GI:54660114"
/translation="VVSTQLLLNGSLAEEEIIIRSENLTNNAKVIIVQLNESVTINCT
RPYNNTRRSTHIGLGRVYYITKIIGDTRQAHCNINREGWNKTLQQVAKKLGGLFNQTT
IIFKPSSGGDPEITTHS"
BASE COUNT 149 a 60 c 67 g 81 t
ORIGIN
1 gtagtgtcaa ctcaactgtt gttgaatgga agtctagcag aagaagagat aataatcaga
61 tctgaaaatc tcacaaataa tgctaaagtc ataatagtac agcttaatga gtctgtaaca
121 attaattgca caaggcccta caacaataca agacgaagta cacatatagg actagggcga
181 gtatactata taacaaagat aataggtgat acaagacaag cacattgtaa cattaatagg
241 gaaggatgga ataaaacttt acaacaggta gctaaaaaat taggaggcct ttttaaccag
301 acaacaataa tttttaaacc atcctcggga ggggacccag aaattacaac acacagc
//
last modified: Tue May 31 10:56 2022