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LOCUS AY611281 450 bp DNA linear VRL 01-JUL-2004
DEFINITION HIV-1 isolate Ac-33 Day 1006 1b6.fa from USA gag protein (gag)
gene, partial cds
ACCESSION AY611281
VERSION AY611281.1 GI:48927780
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 450)
Show all sequences for reference 1
AUTHORS Allen,T.M., Altfeld,M., Yu,X.G., O'Sullivan,K.M., Lichterfeld,M.,
Le Gall,S., John,M., Mothe,B.R., Lee,P.K., Kalife,E.T., Cohen,D.E.,
Freedberg,K.A., Strick,D.A., Johnson,M.N., Sette,A.,
Rosenberg,E.S., Mallal,S.A., Goulder,P.J.R., Brander,C. and
Walker,B.D.
TITLE Selection, Transmission, and Reversion of an Antigen-Processing
Cytotoxic T-Lymphocyte Escape Mutation in Human Immunodeficiency
Virus Type 1 Infection
JOURNAL J. Virol. 78 (13), 7069-7078 (2004)
PUBMED 15194783
REFERENCE 2 (bases 1 to 450)
Show all sequences for reference 2
AUTHORS Allen,T.M., Altfeld,M., Yu,X.G., O'Sullivan,K.M., Lichterfeld,M.,
Le Gall,S., John,M., Mothe,B.R., Lee,P.K., Kalife,E.T., Cohen,D.E.,
Freedberg,K.A., Strick,D.A., Johnson,M.N., Sette,A.,
Rosenberg,E.S., Mallal,S.A., Goulder,P.J.R., Brander,C. and
Walker,B.D.
TITLE Direct Submission
JOURNAL Submitted (28-APR-2004) Infectious Disease Division, Partners AIDS
Research Center and Massachusetts General Hospital, 149 13th
Street, Charlestown, MA 02129, USA
FEATURES Location/Qualifiers
source 1..450
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="Ac-33 Day 1006 1b6.fa"
/db_xref="taxon:11676"
/country="USA"
gene 1..>450
/gene="gag"
CDS 1..>450
/gene="gag"
/codon_start="1"
/transl_table="1"
/product="gag protein"
/protein_id="AAT47602.1"
/db_xref="GI:48927781"
/translation="MGARASVLSGGELDKWEKIRLRPGSKKRYQIKHIVWASRELERF
AVNPGLLETSGGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQKIDIRDTKEALD
KIEEVQNKSKKKAQQAATDTGNNSQVSQNYPIVQNLQGQMVHQPISPR"
BASE COUNT 179 a 84 c 106 g 81 t
ORIGIN
1 atgggtgcga gagcgtcggt attaagcggg ggagaattag ataagtggga aaaaattcgg
61 ttaaggccag ggagtaagaa aagatatcag ataaaacata tagtatgggc aagcagggag
121 ctagaacgat tcgcagtcaa ccctggcctg ttggaaacat caggaggctg tagacaaata
181 ttggaacaac tacagccatc cctccagaca ggatcagaag aacttaaatc attatataat
241 acagtagcaa ccctctattg tgtgcatcaa aagatagaca taagagacac caaggaagct
301 ttagacaaaa tagaggaagt gcaaaacaaa agtaagaaaa aagcacagca agcagcaact
361 gacacaggaa ataacagcca ggtcagtcaa aattacccta tagtgcaaaa ccttcagggg
421 caaatggtac atcagcccat atcacctaga
//
last modified: Tue May 31 10:56 2022