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LOCUS AY611250 450 bp DNA linear VRL 01-JUL-2004
DEFINITION HIV-1 isolate Ac-33 Day 0 1b13.fa from USA gag protein (gag) gene,
partial cds
ACCESSION AY611250
VERSION AY611250.1 GI:48927718
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 450)
Show all sequences for reference 1
AUTHORS Allen,T.M., Altfeld,M., Yu,X.G., O'Sullivan,K.M., Lichterfeld,M.,
Le Gall,S., John,M., Mothe,B.R., Lee,P.K., Kalife,E.T., Cohen,D.E.,
Freedberg,K.A., Strick,D.A., Johnson,M.N., Sette,A.,
Rosenberg,E.S., Mallal,S.A., Goulder,P.J.R., Brander,C. and
Walker,B.D.
TITLE Selection, Transmission, and Reversion of an Antigen-Processing
Cytotoxic T-Lymphocyte Escape Mutation in Human Immunodeficiency
Virus Type 1 Infection
JOURNAL J. Virol. 78 (13), 7069-7078 (2004)
PUBMED 15194783
REFERENCE 2 (bases 1 to 450)
Show all sequences for reference 2
AUTHORS Allen,T.M., Altfeld,M., Yu,X.G., O'Sullivan,K.M., Lichterfeld,M.,
Le Gall,S., John,M., Mothe,B.R., Lee,P.K., Kalife,E.T., Cohen,D.E.,
Freedberg,K.A., Strick,D.A., Johnson,M.N., Sette,A.,
Rosenberg,E.S., Mallal,S.A., Goulder,P.J.R., Brander,C. and
Walker,B.D.
TITLE Direct Submission
JOURNAL Submitted (28-APR-2004) Infectious Disease Division, Partners AIDS
Research Center and Massachusetts General Hospital, 149 13th
Street, Charlestown, MA 02129, USA
FEATURES Location/Qualifiers
source 1..450
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="Ac-33 Day 0 1b13.fa"
/db_xref="taxon:11676"
/country="USA"
gene 1..>450
/gene="gag"
CDS 1..>450
/gene="gag"
/codon_start="1"
/transl_table="1"
/product="gag protein"
/protein_id="AAT47571.1"
/db_xref="GI:48927719"
/translation="MGARASVLSGGELDKWEKIRLRPGSKKRYQLKHIVWASRELERF
AVNPGLLETSGGCRQILEQLQPSLQTGSEELKSLYNTVATLYCVHQKIDIRDTKEALD
KIEEEQNKSKKKAQQAATDTGNSSQVSQNYPIVQNLQGQMVHQPISPR"
BASE COUNT 178 a 84 c 107 g 81 t
ORIGIN
1 atgggtgcga gagcgtcggt attaagcggg ggagaattag ataagtggga aaaaattcgg
61 ttaaggccag ggagtaagaa aagatatcag ttaaaacata tagtatgggc aagcagggag
121 ctagaacgat tcgcagtcaa ccctggcctg ttggaaacat caggaggctg tagacaaata
181 ttggaacaac tacagccatc cctccagaca ggatcagaag aacttaaatc attatataat
241 acagtagcaa ccctctattg tgtgcatcaa aagatagaca taagagacac caaggaagct
301 ttagacaaaa tagaggaaga gcaaaacaaa agtaagaaaa aagcacagca agcagcaact
361 gacacaggaa atagcagcca ggtcagtcaa aattacccta tagtgcaaaa ccttcagggg
421 caaatggtac atcagcccat atcacctaga
//
last modified: Tue May 31 10:56 2022