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LOCUS	    AY605639		     717 bp    RNA     linear	VRL 30-APR-2005
DEFINITION  HIV-1 isolate TH233_RT from Thailand pol protein (pol) gene,
	    partial cds
ACCESSION   AY605639
VERSION     AY605639.1 GI:51342900
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 717)
            Show all sequences for reference 1
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     RT and protease sequences from HIV-1 non-B infected persons from
	    Thailand
  JOURNAL   Unpublished
REFERENCE   2 (bases 1 to 717)
            Show all sequences for reference 2
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2004) Division of Allergy and Clinical
	    Immunology, Department of Medicine, Faculty of Medicine,
	    Chulalongkorn University, Rama IV Road, Bangkok 10330, Thailand
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Kantor,R., Katzenstein,D.A., Efron,B., Carvalho,A.P., Wynhoven,B.,
	    Cane,P., Clarke,J., Sirivichayakul,S., Soares,M.A., Snoeck,J.,
	    Pillay,C., Rudich,H., Rodrigues,R., Holguin,A., Ariyoshi,K.,
	    Bouzas,M.B., Cahn,P., Sugiura,W., Soriano,V., Brigido,L.F.,
	    Grossman,Z., Morris,L., Vandamme,A.M., Tanuri,A., Phanuphak,P.,
	    Weber,J.N., Pillay,D., Harrigan,P.R., Camacho,R., Schapiro,J.M. and
	    Shafer,R.W.
  TITLE     Impact of HIV-1 Subtype and Antiretroviral Therapy on Protease and
	    Reverse Transcriptase Genotype: Results of a Global Collaboration
  JOURNAL   PLoS Med 2 (4), E112 (2005)
  PUBMED    15839752
COMMENT     Subtype assigned by HIV database staff [JM 5/07].
FEATURES             Location/Qualifiers
     source	     1..717
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="TH233_RT"
		     /db_xref="taxon:11676"
		     /country="Thailand"
     gene	     <1..>717
		     /gene="pol"
     CDS	     <1..>717
		     /gene="pol"
		     /note="encodes reverse transcriptase and protease"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAU01495.1"
		     /db_xref="GI:51342901"
		     /translation="GPKVKQWPLTEEKIKALTEICKELEEEGKISKIGPENPYNTPIF
		     AIKKKNSDKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVP
		     LDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRIKNPE
		     IVIYQYMDDLYVGSDLEIGQHRTKIEELRAHLWKWGFYTPDKKHQKEPPFLWMGYELH
		     PDKWTVQPIELPERDSWTVND"
BASE COUNT	286 a	 119 c	  153 g    159 t
ORIGIN
       1 ggaccaaagg ttaaacagtg gccattgaca gaagaaaaaa taaaagcatt aacagagatt 
      61 tgtaaagagc tggaagagga aggaaaaatc tcaaaaatcg ggcctgaaaa tccatacaat 
     121 actccaatat ttgctataaa gaaaaagaac agcgacaaat ggagaaaatt agtagatttt 
     181 agagagctca ataaaagaac tcaggacttt tgggaagttc aattaggaat accgcatcca 
     241 gcaggtttaa aaaagaaaaa atcagtaaca gtactagatg tgggagatgc atatttttca 
     301 gttcctttag atgaaagctt tagaaagtat acagcattca ccatacctag tataaacaat 
     361 gagacaccag gaatcagata tcagtacaat gtgctgccac agggatggaa agggtcaccg 
     421 gcaatattcc agagtagcat gacaaaaatc ttagagccct ttagaataaa aaatccagaa 
     481 atagttatct atcaatacat ggatgacttg tatgtaggat ctgatttaga aatagggcag 
     541 cacagaacaa aaatagagga gctgagagct catctatgga aatggggatt ttatacacca 
     601 gacaaaaagc atcagaagga gcctccattc ctttggatgg gatatgaact ccatcctgac 
     661 aaatggacag tccagcctat agaactgcca gaaagagaca gctggactgt caatgat
//
last modified: Tue May 31 10:56 2022


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