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LOCUS AY605636 726 bp RNA linear VRL 30-APR-2005
DEFINITION HIV-1 isolate TH230_RT from Thailand pol protein (pol) gene,
partial cds
ACCESSION AY605636
VERSION AY605636.1 GI:51342894
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 726)
Show all sequences for reference 1
AUTHORS Sirivichayakul,S. and Phanuphak,P.
TITLE RT and protease sequences from HIV-1 non-B infected persons from
Thailand
JOURNAL Unpublished
REFERENCE 2 (bases 1 to 726)
Show all sequences for reference 2
AUTHORS Sirivichayakul,S. and Phanuphak,P.
TITLE Direct Submission
JOURNAL Submitted (23-APR-2004) Division of Allergy and Clinical
Immunology, Department of Medicine, Faculty of Medicine,
Chulalongkorn University, Rama IV Road, Bangkok 10330, Thailand
REFERENCE 3
Show all sequences for reference 3
AUTHORS Kantor,R., Katzenstein,D.A., Efron,B., Carvalho,A.P., Wynhoven,B.,
Cane,P., Clarke,J., Sirivichayakul,S., Soares,M.A., Snoeck,J.,
Pillay,C., Rudich,H., Rodrigues,R., Holguin,A., Ariyoshi,K.,
Bouzas,M.B., Cahn,P., Sugiura,W., Soriano,V., Brigido,L.F.,
Grossman,Z., Morris,L., Vandamme,A.M., Tanuri,A., Phanuphak,P.,
Weber,J.N., Pillay,D., Harrigan,P.R., Camacho,R., Schapiro,J.M. and
Shafer,R.W.
TITLE Impact of HIV-1 Subtype and Antiretroviral Therapy on Protease and
Reverse Transcriptase Genotype: Results of a Global Collaboration
JOURNAL PLoS Med 2 (4), E112 (2005)
PUBMED 15839752
COMMENT Subtype assigned by HIV database staff [JM 5/07].
FEATURES Location/Qualifiers
source 1..726
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="TH230_RT"
/db_xref="taxon:11676"
/country="Thailand"
gene <1..>726
/gene="pol"
CDS <1..>726
/gene="pol"
/note="encodes reverse transcriptase and protease"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAU01492.1"
/db_xref="GI:51342895"
/translation="WLGPKVKQWPLTEEKIKALTEICKELEEAGKISKIGPENPYNTP
IFAIKKKNSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFS
IPLDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKN
PEIVIYQYMDDLYVGSDLEIGQHRAKIEELRAFLWKWGFYTPDKKHQKEPPFLWMGYE
LHPDRWTVQPIELPEKDSWTVNDI"
BASE COUNT 285 a 122 c 152 g 167 t
ORIGIN
1 tggctcggac caaaggttaa acagtggcca ttgacagaag aaaaaataaa agcattaaca
61 gaaatttgta aagagttgga agaggctgga aaaatctcaa aaattgggcc tgaaaatcca
121 tacaatactc caatatttgc tataaagaaa aagaacagca ccaaatggag gaaattagta
181 gatttcagag agctcaataa aagaactcag gacttttggg aagttcagtt aggaatacct
241 catccagcag gtttaaaaaa gaaaaaatca gtaacagtac tagatgtggg ggatgcatat
301 ttttcaattc ctttagatga aagctttaga aagtatactg cattcaccat acctagtata
361 aacaatgaga caccaggaat cagatatcag tacaatgtgc tgccacaggg atggaaagga
421 tcaccagcaa tattccagag tagcatgaca aaaatcttag agccctttag aacaaaaaat
481 ccagaaatag ttatctatca atacatggat gacttgtatg taggatctga tttagaaata
541 gggcagcaca gagcaaaaat agaggagcta agagcttttc tatggaaatg ggggttttat
601 acaccagaca aaaagcatca gaaggaacct ccattccttt ggatgggata tgaactccat
661 cctgacagat ggacagtcca gcctatagaa ctgccagaaa aagacagctg gactgtcaat
721 gatata
//
last modified: Tue May 31 10:56 2022