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LOCUS	    AY605636		     726 bp    RNA     linear	VRL 30-APR-2005
DEFINITION  HIV-1 isolate TH230_RT from Thailand pol protein (pol) gene,
	    partial cds
ACCESSION   AY605636
VERSION     AY605636.1 GI:51342894
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 726)
            Show all sequences for reference 1
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     RT and protease sequences from HIV-1 non-B infected persons from
	    Thailand
  JOURNAL   Unpublished
REFERENCE   2 (bases 1 to 726)
            Show all sequences for reference 2
  AUTHORS   Sirivichayakul,S. and Phanuphak,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (23-APR-2004) Division of Allergy and Clinical
	    Immunology, Department of Medicine, Faculty of Medicine,
	    Chulalongkorn University, Rama IV Road, Bangkok 10330, Thailand
REFERENCE   3
            Show all sequences for reference 3
  AUTHORS   Kantor,R., Katzenstein,D.A., Efron,B., Carvalho,A.P., Wynhoven,B.,
	    Cane,P., Clarke,J., Sirivichayakul,S., Soares,M.A., Snoeck,J.,
	    Pillay,C., Rudich,H., Rodrigues,R., Holguin,A., Ariyoshi,K.,
	    Bouzas,M.B., Cahn,P., Sugiura,W., Soriano,V., Brigido,L.F.,
	    Grossman,Z., Morris,L., Vandamme,A.M., Tanuri,A., Phanuphak,P.,
	    Weber,J.N., Pillay,D., Harrigan,P.R., Camacho,R., Schapiro,J.M. and
	    Shafer,R.W.
  TITLE     Impact of HIV-1 Subtype and Antiretroviral Therapy on Protease and
	    Reverse Transcriptase Genotype: Results of a Global Collaboration
  JOURNAL   PLoS Med 2 (4), E112 (2005)
  PUBMED    15839752
COMMENT     Subtype assigned by HIV database staff [JM 5/07].
FEATURES             Location/Qualifiers
     source	     1..726
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="TH230_RT"
		     /db_xref="taxon:11676"
		     /country="Thailand"
     gene	     <1..>726
		     /gene="pol"
     CDS	     <1..>726
		     /gene="pol"
		     /note="encodes reverse transcriptase and protease"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAU01492.1"
		     /db_xref="GI:51342895"
		     /translation="WLGPKVKQWPLTEEKIKALTEICKELEEAGKISKIGPENPYNTP
		     IFAIKKKNSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFS
		     IPLDESFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKN
		     PEIVIYQYMDDLYVGSDLEIGQHRAKIEELRAFLWKWGFYTPDKKHQKEPPFLWMGYE
		     LHPDRWTVQPIELPEKDSWTVNDI"
BASE COUNT	285 a	 122 c	  152 g    167 t
ORIGIN
       1 tggctcggac caaaggttaa acagtggcca ttgacagaag aaaaaataaa agcattaaca 
      61 gaaatttgta aagagttgga agaggctgga aaaatctcaa aaattgggcc tgaaaatcca 
     121 tacaatactc caatatttgc tataaagaaa aagaacagca ccaaatggag gaaattagta 
     181 gatttcagag agctcaataa aagaactcag gacttttggg aagttcagtt aggaatacct 
     241 catccagcag gtttaaaaaa gaaaaaatca gtaacagtac tagatgtggg ggatgcatat 
     301 ttttcaattc ctttagatga aagctttaga aagtatactg cattcaccat acctagtata 
     361 aacaatgaga caccaggaat cagatatcag tacaatgtgc tgccacaggg atggaaagga 
     421 tcaccagcaa tattccagag tagcatgaca aaaatcttag agccctttag aacaaaaaat 
     481 ccagaaatag ttatctatca atacatggat gacttgtatg taggatctga tttagaaata 
     541 gggcagcaca gagcaaaaat agaggagcta agagcttttc tatggaaatg ggggttttat 
     601 acaccagaca aaaagcatca gaaggaacct ccattccttt ggatgggata tgaactccat 
     661 cctgacagat ggacagtcca gcctatagaa ctgccagaaa aagacagctg gactgtcaat 
     721 gatata
//
last modified: Tue May 31 10:56 2022


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