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LOCUS AY535558 387 bp DNA linear VRL 17-AUG-2005
DEFINITION HIV-1 isolate 065 from Estonia envelope glycoprotein (env) gene,
partial cds
ACCESSION AY535558
VERSION AY535558.1 GI:46242951
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 387)
Show all sequences for reference 1
AUTHORS Adojaan,M., Kivisild,T., Mannik,A., Krispin,T., Ustina,V.,
Zilmer,K., Liebert,E., Jaroslavtsev,N., Priimagi,L., Tefanova,V.,
Schmidt,J., Krohn,K., Villems,R., Salminen,M. and Ustav,M.
TITLE Predominance of a Rare Type of HIV-1 in Estonia
JOURNAL J. Acquir. Immune Defic. Syndr. 39 (5), 598-605 (2005)
PUBMED 16044014
REFERENCE 2 (bases 1 to 387)
Show all sequences for reference 2
AUTHORS Adojaan,M., Kivisild,T., Mannik,A., Krispin,T., Ustina,V.,
Zilmer,K., Liebert,E., Jaroslavtsev,N., Priimagi,L., Tefanova,V.,
Schmidt,J., Krohn,K., Villems,R., Salminen,M. and Ustav,M.
TITLE Direct Submission
JOURNAL Submitted (30-JAN-2004) FIT Biotech OYj Plc Eesti Filiaal, Nooruse
9, Tartu 50411, Estonia
FEATURES Location/Qualifiers
source 1..387
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="065"
/isolation_source="peripheral blood mononuclear cells"
/db_xref="taxon:11676"
/country="Estonia"
/note="subtype: CRF06-cpx; group: M"
gene <1..>387
/gene="env"
CDS <1..>387
/gene="env"
/note="gp41"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAS83580.1"
/db_xref="GI:46242952"
/translation="SNLLRAIEAQQHLLQLTVWGIKQLQARVLALERYIKDQQLLGIW
GCTGKLICPTNVPWNDSWSNKTFEEIWNNMTWIEWEREINNYTSXIYTLIEESQNQQE
KNEQELLALDKWASLWNWFDISNWLW"
BASE COUNT 136 a 66 c 93 g 91 t 1 other
ORIGIN
1 gagcaatttg ctgagagcta tagaggcgca acagcatttg ttgcaactca cagtctgggg
61 cattaaacag ctccaggcaa gagtcctggc gttggagaga tacataaagg atcaacagct
121 cctaggaatt tggggatgca ctggaaaact catctgcccc actaatgtgc cctggaatga
181 tagttggagt aataaaactt ttgaagaaat ttggaataac atgacctgga tagaatggga
241 aagagaaatt aacaattaca catcacwtat atacacccta attgaagaat cgcaaaatca
301 gcaggaaaag aatgaacaag aattactagc attggacaag tgggcaagtt tgtggaattg
361 gtttgacata tcaaactggc tgtggta
//
last modified: Tue May 31 10:56 2022