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LOCUS AY525457 1048 bp RNA linear VRL 14-JUN-2004
DEFINITION HIV-1 isolate F15C from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION AY525457
VERSION AY525457.1 GI:42425567
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1048)
Show all sequences for reference 1
AUTHORS Sagar,M., Kirkegaard,E., Long,E.M., Celum,C., Buchbinder,S.,
Daar,E.S. and Overbaugh,J.
TITLE Human Immunodeficiency Virus Type 1 (HIV-1) Diversity at Time of
Infection Is Not Restricted to Certain Risk Groups or Specific
HIV-1 Subtypes
JOURNAL J. Virol. 78 (13), 7279-7283 (2004)
PUBMED 15194805
REFERENCE 2 (bases 1 to 1048)
Show all sequences for reference 2
AUTHORS Sagar,M. and Overbaugh,J.
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2004) Division of Human Biology, Fred Hutchinson
Cancer Research Center, 1100 Fairview Avenue North, C3-168,
Seattle, WA 98109, USA
FEATURES Location/Qualifiers
source 1..1048
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="F15C"
/db_xref="taxon:11676"
/country="USA"
gene <1..>1048
/gene="env"
CDS <1..>1048
/gene="env"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAS16418.1"
/db_xref="GI:42425568"
/translation="LCVTLNCTDFGNDTITNNSSEKVMEKGEIKNCSFEITSSIRDKT
QKEYALFYKQDVVSIENDNTTYRLISCNTSVITQACPKVSFEPIPIHHCAPAGFAILK
CNDKKFNGKGPCTNVSTVQCTHGIRLVVSTQLLLNGSLAEEEVVIRSNNFSNNAKIII
VQLNESVIINCTRPDNNTRKSISIGPGRAFYATGDIIGDIRQAHCNVSRTEWNDTLQK
IAIKLGEQFGNKTIVFNKSSGGDLEIVTHSFNCGGEFFYCNTTQLFDSTWVNGTWNNG
RSNNTGGNDTITLPCKIKQIVNRWQEVGKAMYAPPIRGLIRCSSNITGLLLTRDGGNG
NENSNNETFRPAGGD"
BASE COUNT 403 a 163 c 215 g 267 t
ORIGIN
1 actctgtgtt actttaaatt gcactgattt tgggaatgat actattacca ataatagtag
61 cgagaaagta atggagaaag gagaaataaa aaattgctct ttcgagatca cctcaagcat
121 aagagataag acgcagaaag aatatgcact tttttataaa caggatgtag tatcaataga
181 gaatgataat actacctata ggttaataag ttgtaacacc tcagtcatta cacaggcctg
241 tccaaaggta tcctttgagc caattcccat acatcattgt gccccggctg gttttgcgat
301 tctaaagtgt aatgataaga agttcaatgg aaaaggacca tgtacaaatg tcagcacagt
361 acaatgtaca catggaatta ggctagtagt atcaactcaa ctgctgttaa atggcagtct
421 agcagaagaa gaggtagtaa ttagatccaa caacttctcg aacaatgcta aaattataat
481 agtacagttg aatgaatctg taataattaa ttgtacaaga cccgacaaca atacaagaaa
541 aagtatatct ataggaccag gcagagcatt ttatgcgaca ggagacataa taggagatat
601 aaggcaagca cattgtaatg ttagtagaac agaatggaat gacactttac aaaaaatagc
661 tataaaatta ggagaacaat ttgggaataa aacaatagtc tttaataaat catcaggagg
721 ggacctagaa attgtaacgc acagttttaa ttgtggaggg gaatttttct actgtaatac
781 aacacagctg tttgatagta cttgggttaa tggtacttgg aataatggaa ggtcaaataa
841 cactggagga aatgacacaa tcacactccc atgcaaaata aaacaaattg taaacaggtg
901 gcaggaagta ggaaaagcaa tgtatgcccc tcccatcaga ggactaatta gatgttcatc
961 aaatattaca gggctgctac taacaagaga tggtggtaat ggtaatgaaa atagcaataa
1021 cgagaccttc agacctgcag gaggagat
//
last modified: Tue May 31 10:56 2022