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LOCUS AY525456 1051 bp RNA linear VRL 14-JUN-2004
DEFINITION HIV-1 isolate F15D from USA envelope glycoprotein (env) gene,
partial cds
ACCESSION AY525456
VERSION AY525456.1 GI:42425565
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1051)
Show all sequences for reference 1
AUTHORS Sagar,M., Kirkegaard,E., Long,E.M., Celum,C., Buchbinder,S.,
Daar,E.S. and Overbaugh,J.
TITLE Human Immunodeficiency Virus Type 1 (HIV-1) Diversity at Time of
Infection Is Not Restricted to Certain Risk Groups or Specific
HIV-1 Subtypes
JOURNAL J. Virol. 78 (13), 7279-7283 (2004)
PUBMED 15194805
REFERENCE 2 (bases 1 to 1051)
Show all sequences for reference 2
AUTHORS Sagar,M. and Overbaugh,J.
TITLE Direct Submission
JOURNAL Submitted (13-JAN-2004) Division of Human Biology, Fred Hutchinson
Cancer Research Center, 1100 Fairview Avenue North, C3-168,
Seattle, WA 98109, USA
FEATURES Location/Qualifiers
source 1..1051
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="F15D"
/db_xref="taxon:11676"
/country="USA"
gene <1..>1051
/gene="env"
CDS <1..>1051
/gene="env"
/codon_start="2"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAS16417.1"
/db_xref="GI:42425566"
/translation="LCVTLNCTDFGNDTITNNSSEKVMEKGEIKNCSFEITSSIRDKK
QKEYALFYKQDVVSIDDNDNTTYRLISCNTSVITQACPKVSFEPIPIYCCAPAGFAIL
KCNDKKFNGKGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSNNFSNNAKII
IVQLNESVIINCTRLNNNTRKSISIGPGRAFYATGDIIGDIRQAHCNVSGTEWNNTLQ
KIVIKLREQFGNKTIVFNKSSGGDLEIVTHSFNCGGEFFYCNTTQLFDSTWVNGTWNN
RRSNSTGGNDTITLPCKIKQIVNRWQEVGKAMYAPPIRGLIRCSSNITGLLLTRDGGN
GNESSNNETFRPAGGD"
BASE COUNT 406 a 159 c 214 g 272 t
ORIGIN
1 actctgtgtt actttaaatt gcactgattt tgggaatgat actattacca ataatagtag
61 cgagaaagta atggagaaag gagaaataaa aaattgctct ttcgagatca cctcaagcat
121 aagagataag aagcagaaag aatatgcact tttttataaa caggatgtgg tatcaataga
181 tgataatgat aatactacct ataggttaat aagttgtaac acctcagtca ttacacaggc
241 ctgtccaaag gtatcctttg agccaattcc catatattgt tgtgccccgg ctggttttgc
301 gattttaaag tgtaatgata agaagttcaa tggaaaagga ccatgtacaa atgtcagcac
361 agtacaatgt acacatggaa ttaagccagt agtatcaact caactgctgt taaatggcag
421 tctagcagaa gaagaggtag taattagatc caacaacttc tcgaacaatg ctaaaattat
481 aatagtacag ctgaatgaat ctgtaataat taattgtaca agactcaaca acaatacaag
541 aaaaagtata tctataggac caggcagagc attttatgcg acaggagaca taataggaga
601 tataaggcaa gcacattgta atgttagtgg aacagaatgg aataacactt tacaaaaaat
661 agttataaaa ttaagagaac aatttgggaa taaaacaata gtctttaata aatcatcagg
721 aggggaccta gaaattgtaa cacacagttt taattgtgga ggggaatttt tctactgtaa
781 tacaacacag ctgtttgata gtacttgggt taatggtact tggaataata gaaggtcaaa
841 tagcactgga ggaaatgaca caatcacact cccatgcaaa ataaaacaaa ttgtaaacag
901 gtggcaggaa gtaggaaaag caatgtatgc ccctcccatc agaggactaa ttagatgttc
961 atcaaatatt acagggctgc tactaacaag agatggtggt aatggtaatg aaagtagcaa
1021 taacgagacc ttcagacctg caggaggaga t
//
last modified: Tue May 31 10:56 2022