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LOCUS	    AY525456		    1051 bp    RNA     linear	VRL 14-JUN-2004
DEFINITION  HIV-1 isolate F15D from USA envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   AY525456
VERSION     AY525456.1 GI:42425565
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1051)
            Show all sequences for reference 1
  AUTHORS   Sagar,M., Kirkegaard,E., Long,E.M., Celum,C., Buchbinder,S.,
	    Daar,E.S. and Overbaugh,J.
  TITLE     Human Immunodeficiency Virus Type 1 (HIV-1) Diversity at Time of
	    Infection Is Not Restricted to Certain Risk Groups or Specific
	    HIV-1 Subtypes
  JOURNAL   J. Virol. 78 (13), 7279-7283 (2004)
  PUBMED    15194805
REFERENCE   2 (bases 1 to 1051)
            Show all sequences for reference 2
  AUTHORS   Sagar,M. and Overbaugh,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-JAN-2004) Division of Human Biology, Fred Hutchinson
	    Cancer Research Center, 1100 Fairview Avenue North, C3-168,
	    Seattle, WA 98109, USA
FEATURES             Location/Qualifiers
     source	     1..1051
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="F15D"
		     /db_xref="taxon:11676"
		     /country="USA"
     gene	     <1..>1051
		     /gene="env"
     CDS	     <1..>1051
		     /gene="env"
		     /codon_start="2"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAS16417.1"
		     /db_xref="GI:42425566"
		     /translation="LCVTLNCTDFGNDTITNNSSEKVMEKGEIKNCSFEITSSIRDKK
		     QKEYALFYKQDVVSIDDNDNTTYRLISCNTSVITQACPKVSFEPIPIYCCAPAGFAIL
		     KCNDKKFNGKGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSNNFSNNAKII
		     IVQLNESVIINCTRLNNNTRKSISIGPGRAFYATGDIIGDIRQAHCNVSGTEWNNTLQ
		     KIVIKLREQFGNKTIVFNKSSGGDLEIVTHSFNCGGEFFYCNTTQLFDSTWVNGTWNN
		     RRSNSTGGNDTITLPCKIKQIVNRWQEVGKAMYAPPIRGLIRCSSNITGLLLTRDGGN
		     GNESSNNETFRPAGGD"
BASE COUNT	406 a	 159 c	  214 g    272 t
ORIGIN
       1 actctgtgtt actttaaatt gcactgattt tgggaatgat actattacca ataatagtag 
      61 cgagaaagta atggagaaag gagaaataaa aaattgctct ttcgagatca cctcaagcat 
     121 aagagataag aagcagaaag aatatgcact tttttataaa caggatgtgg tatcaataga 
     181 tgataatgat aatactacct ataggttaat aagttgtaac acctcagtca ttacacaggc 
     241 ctgtccaaag gtatcctttg agccaattcc catatattgt tgtgccccgg ctggttttgc 
     301 gattttaaag tgtaatgata agaagttcaa tggaaaagga ccatgtacaa atgtcagcac 
     361 agtacaatgt acacatggaa ttaagccagt agtatcaact caactgctgt taaatggcag 
     421 tctagcagaa gaagaggtag taattagatc caacaacttc tcgaacaatg ctaaaattat 
     481 aatagtacag ctgaatgaat ctgtaataat taattgtaca agactcaaca acaatacaag 
     541 aaaaagtata tctataggac caggcagagc attttatgcg acaggagaca taataggaga 
     601 tataaggcaa gcacattgta atgttagtgg aacagaatgg aataacactt tacaaaaaat 
     661 agttataaaa ttaagagaac aatttgggaa taaaacaata gtctttaata aatcatcagg 
     721 aggggaccta gaaattgtaa cacacagttt taattgtgga ggggaatttt tctactgtaa 
     781 tacaacacag ctgtttgata gtacttgggt taatggtact tggaataata gaaggtcaaa 
     841 tagcactgga ggaaatgaca caatcacact cccatgcaaa ataaaacaaa ttgtaaacag 
     901 gtggcaggaa gtaggaaaag caatgtatgc ccctcccatc agaggactaa ttagatgttc 
     961 atcaaatatt acagggctgc tactaacaag agatggtggt aatggtaatg aaagtagcaa 
    1021 taacgagacc ttcagacctg caggaggaga t
//
last modified: Tue May 31 10:56 2022


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