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LOCUS AY471938 1022 bp RNA linear VRL 07-JUN-2004
DEFINITION HIV-1 isolate 214016 from USA pol protein (pol) gene, partial cds
ACCESSION AY471938
VERSION AY471938.1 GI:44887281
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 1022)
Show all sequences for reference 1
AUTHORS Weinstock,H.S., Zaidi,I., Heneine,W., Bennett,D.,
Garcia-Lerma,J.G., Douglas,J.M. Jr.., LaLota,M., Dickinson,G.,
Schwarcz,S., Torian,L., Wendell,D., Paul,S., Goza,G.A., Ruiz,J.,
Boyett,B. and Kaplan,J.E.
TITLE The Epidemiology of Antiretroviral Drug Resistance among Drug-Naive
HIV-1-Infected Persons in 10 US Cities
JOURNAL J. Infect. Dis. 189 (12), 2174-2180 (2004)
PUBMED 15181563
REFERENCE 2 (bases 1 to 1022)
Show all sequences for reference 2
AUTHORS Weinstock,H., Zaidi,I., Heneine,W., Bennett,D., Garcia-Lerma,G. and
Kaplan,J.
TITLE Direct Submission
JOURNAL Submitted (18-NOV-2003) Division of HIV/AIDS Prevention,
Surveillance and Epidemiology, Centers for Disease Control and
Prevention, 1600 Clifton Road, MS E02, Atlanta, GA 30333, USA
FEATURES Location/Qualifiers
source 1..1022
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="214016"
/db_xref="taxon:11676"
/country="USA"
gene <1..>1022
/gene="pol"
CDS <1..>1022
/gene="pol"
/codon_start="1"
/transl_table="1"
/product="pol protein"
/protein_id="AAS47970.1"
/db_xref="GI:44887282"
/translation="FPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWK
PKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPI
SPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV
FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSV
PLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNP
DIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYEL
HPDKWTV"
BASE COUNT 394 a 170 c 210 g 248 t
ORIGIN
1 ttccctcaaa tcactctttg gcaacgaccc cttgtcacaa taaagatagg ggggcagcta
61 aaggaagctt tattagatac aggagcagat gatacagtat tagaagaaat gaatttgcca
121 ggaagatgga aaccaaaaat gattggggga attggaggtt ttatcaaagt aagacaatat
181 gatcagatac ccatagaaat ctgtgggcat aaagctatag gtacagtatt agtaggacct
241 acacctgtca acataattgg aagaaatctg ttgactcaga ttggttgcac tttaaatttt
301 cccattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaaa
361 gttaaacaat ggccattgac agaagaaaaa ataaaagcat tagtagaaat ttgtacagag
421 atggaaaagg aagggaaaat ttcaaaaatt gggcctgaaa acccatacaa tactccagta
481 tttgccataa agaaaaagga cagtactaaa tggagaaaat tagtagattt tagagaactt
541 aataaaagaa ctcaagactt ctgggaagtt caattaggaa taccccatcc cgcagggtta
601 aaaaagaaaa aatcagtaac agtactggat gtgggtgatg catatttttc agttccctta
661 gataaagact tcaggaagta tactgcattt accataccta gtataaacaa tgagacccca
721 gggattagat atcaatacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc
781 caatgtagca tgacaaaaat cttagagcct tttaggaaac aaaatccaga catagttatc
841 tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcatagaaca
901 aaaatagagg aactgagaca acacctgttg aagtggggat tcaccacacc agacaaaaaa
961 catcagaaag aacccccatt tctttggatg ggttatgagc tccatcctga taaatggaca
1021 gt
//
last modified: Tue May 31 10:56 2022