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LOCUS	    AY471938		    1022 bp    RNA     linear	VRL 07-JUN-2004
DEFINITION  HIV-1 isolate 214016 from USA pol protein (pol) gene, partial cds
ACCESSION   AY471938
VERSION     AY471938.1 GI:44887281
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 1022)
            Show all sequences for reference 1
  AUTHORS   Weinstock,H.S., Zaidi,I., Heneine,W., Bennett,D.,
	    Garcia-Lerma,J.G., Douglas,J.M. Jr.., LaLota,M., Dickinson,G.,
	    Schwarcz,S., Torian,L., Wendell,D., Paul,S., Goza,G.A., Ruiz,J.,
	    Boyett,B. and Kaplan,J.E.
  TITLE     The Epidemiology of Antiretroviral Drug Resistance among Drug-Naive
	    HIV-1-Infected Persons in 10 US Cities
  JOURNAL   J. Infect. Dis. 189 (12), 2174-2180 (2004)
  PUBMED    15181563
REFERENCE   2 (bases 1 to 1022)
            Show all sequences for reference 2
  AUTHORS   Weinstock,H., Zaidi,I., Heneine,W., Bennett,D., Garcia-Lerma,G. and
	    Kaplan,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-NOV-2003) Division of HIV/AIDS Prevention,
	    Surveillance and Epidemiology, Centers for Disease Control and
	    Prevention, 1600 Clifton Road, MS E02, Atlanta, GA 30333, USA
FEATURES             Location/Qualifiers
     source	     1..1022
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="214016"
		     /db_xref="taxon:11676"
		     /country="USA"
     gene	     <1..>1022
		     /gene="pol"
     CDS	     <1..>1022
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="pol protein"
		     /protein_id="AAS47970.1"
		     /db_xref="GI:44887282"
		     /translation="FPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWK
		     PKMIGGIGGFIKVRQYDQIPIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPI
		     SPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPV
		     FAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSV
		     PLDKDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILEPFRKQNP
		     DIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLKWGFTTPDKKHQKEPPFLWMGYEL
		     HPDKWTV"
BASE COUNT	394 a	 170 c	  210 g    248 t
ORIGIN
       1 ttccctcaaa tcactctttg gcaacgaccc cttgtcacaa taaagatagg ggggcagcta 
      61 aaggaagctt tattagatac aggagcagat gatacagtat tagaagaaat gaatttgcca 
     121 ggaagatgga aaccaaaaat gattggggga attggaggtt ttatcaaagt aagacaatat 
     181 gatcagatac ccatagaaat ctgtgggcat aaagctatag gtacagtatt agtaggacct 
     241 acacctgtca acataattgg aagaaatctg ttgactcaga ttggttgcac tttaaatttt 
     301 cccattagtc ctattgaaac tgtaccagta aaattaaagc caggaatgga tggcccaaaa 
     361 gttaaacaat ggccattgac agaagaaaaa ataaaagcat tagtagaaat ttgtacagag 
     421 atggaaaagg aagggaaaat ttcaaaaatt gggcctgaaa acccatacaa tactccagta 
     481 tttgccataa agaaaaagga cagtactaaa tggagaaaat tagtagattt tagagaactt 
     541 aataaaagaa ctcaagactt ctgggaagtt caattaggaa taccccatcc cgcagggtta 
     601 aaaaagaaaa aatcagtaac agtactggat gtgggtgatg catatttttc agttccctta 
     661 gataaagact tcaggaagta tactgcattt accataccta gtataaacaa tgagacccca 
     721 gggattagat atcaatacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc 
     781 caatgtagca tgacaaaaat cttagagcct tttaggaaac aaaatccaga catagttatc 
     841 tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcatagaaca 
     901 aaaatagagg aactgagaca acacctgttg aagtggggat tcaccacacc agacaaaaaa 
     961 catcagaaag aacccccatt tctttggatg ggttatgagc tccatcctga taaatggaca 
    1021 gt
//
last modified: Tue May 31 10:56 2022


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