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LOCUS	    AY455322		     297 bp    RNA     linear	VRL 12-APR-2004
DEFINITION  HIV-1 isolate patient 57 clone PR3 from USA protease (pol) gene,
	    partial cds
ACCESSION   AY455322
VERSION     AY455322.1 GI:42564293
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Kieffer,T.L., Finucane,M.M., Nettles,R.E., Quinn,T.C., Broman,K.W.,
	    Ray,S.C., Persaud,D. and Siliciano,R.F.
  TITLE     Genotypic Analysis of HIV-1 Drug Resistance at the Limit of
	    Detection: Virus Production without Evolution in Treated Adults
	    with Undetectable HIV Loads
  JOURNAL   J. Infect. Dis. 189 (8), 1452-1465 (2004)
  PUBMED    15073683
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Kieffer,T.L., Finucane,M.M., Nettles,R.E., Quinn,T.C., Broman,K.W.,
	    Ray,S.C., Persaud,D. and Siliciano,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-OCT-2003) Department of Medicine, Division of
	    Infectious Diseases, Johns Hopkins University School of Medicine,
	    720 Rutland Avenue, Ross 1049, Baltimore, MD 21205, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="patient 57"
		     /isolation_source="plasma from patient with 17 months of
		     ART"
		     /db_xref="taxon:11676"
		     /clone="PR3"
		     /country="USA"
     gene	     <1..>297
		     /gene="pol"
		     /note="PR"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAS20623.1"
		     /db_xref="GI:42564294"
		     /translation="PQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMNLPGRWKP
		     KMIGGIGGFIKVKQYDQIPIEICGHKAIGTVLIGPTPVNIIGRNLLTQLGCTLNF"
BASE COUNT	107 a	  50 c	   66 g     74 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccctc gtcacaataa agataggagg gcaactaaag 
      61 gaagctcttt tagatacagg agcggatgat acagtgttag aagaaatgaa tttgccagga 
     121 agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaaa acagtatgat 
     181 cagataccca tagaaatctg tggacataag gctataggta cagtattaat aggacctaca 
     241 cctgtcaaca taattggaag aaacctgttg actcagcttg gttgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022


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