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LOCUS AY429241 297 bp RNA linear VRL 05-JAN-2004
DEFINITION HIV-1 isolate C45p22_5.5 from USA protease (pol) gene, partial cds
ACCESSION AY429241
VERSION AY429241.1 GI:40455990
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 297)
Show all sequences for reference 1
AUTHORS Persaud,D., Siberry,G.K., Ahonkhai,A., Kajdas,J., Monie,D.,
Hutton,N., Watson,D.C., Quinn,T.C., Ray,S.C. and Siliciano,R.F.
TITLE Continued Production of Drug-Sensitive Human Immunodeficiency Virus
Type 1 in Children on Combination Antiretroviral Therapy Who Have
Undetectable Viral Loads
JOURNAL J. Virol. 78 (2), 968-979 (2004)
PUBMED 14694128
REFERENCE 2 (bases 1 to 297)
Show all sequences for reference 2
AUTHORS Persaud,D., Siberry,G.K., Ahonkhai,A., Kajdas,J., Monie,D.,
Hutton,N., Watson,D.C., Quinn,T.C., Ray,S.C. and Siliciano,R.F.
TITLE Direct Submission
JOURNAL Submitted (08-OCT-2003) Department of Medicine, Division of
Infectious Diseases, Johns Hopkins University School of Medicine,
720 Rutland Avenue, Ross 1049, Baltimore, MD 21205, USA
FEATURES Location/Qualifiers
source 1..297
/organism="Human immunodeficiency virus 1"
/mol_type="genomic RNA"
/isolate="C45p22_5.5"
/isolation_source="plasma; pediatric patient C45, 22
months of ART"
/db_xref="taxon:11676"
/clone="5.5"
/country="USA"
/note="subtype: B"
gene <1..>297
/gene="pol"
CDS <1..>297
/gene="pol"
/note="PR"
/codon_start="1"
/transl_table="1"
/product="protease"
/protein_id="AAR86085.1"
/db_xref="GI:40455991"
/translation="PQITLWQRPIVTIKIEGQLREALIDTGADDTVFEDIGLPGRWTP
KMIGGIGGFVKVKQYDQVLVEICGHKAIGTVLVGPTPANIIGRNLLTQIGCTLNF"
BASE COUNT 105 a 48 c 69 g 75 t
ORIGIN
1 cctcaaatca ctctttggca acgacccatc gtcacaataa agatagaggg gcaactaagg
61 gaagctctaa tagatacagg agcagatgat acagtgtttg aagacatagg gttgccagga
121 agatggacac caaaaatgat agggggaatt ggaggttttg tcaaagtaaa acaatatgat
181 caagtacttg tagaaatttg tggacataaa gctataggta cagtattagt aggacctaca
241 cctgccaaca taattggacg aaatctgttg actcagattg gttgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022