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LOCUS	    AY429241		     297 bp    RNA     linear	VRL 05-JAN-2004
DEFINITION  HIV-1 isolate C45p22_5.5 from USA protease (pol) gene, partial cds
ACCESSION   AY429241
VERSION     AY429241.1 GI:40455990
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Persaud,D., Siberry,G.K., Ahonkhai,A., Kajdas,J., Monie,D.,
	    Hutton,N., Watson,D.C., Quinn,T.C., Ray,S.C. and Siliciano,R.F.
  TITLE     Continued Production of Drug-Sensitive Human Immunodeficiency Virus
	    Type 1 in Children on Combination Antiretroviral Therapy Who Have
	    Undetectable Viral Loads
  JOURNAL   J. Virol. 78 (2), 968-979 (2004)
  PUBMED    14694128
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Persaud,D., Siberry,G.K., Ahonkhai,A., Kajdas,J., Monie,D.,
	    Hutton,N., Watson,D.C., Quinn,T.C., Ray,S.C. and Siliciano,R.F.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-OCT-2003) Department of Medicine, Division of
	    Infectious Diseases, Johns Hopkins University School of Medicine,
	    720 Rutland Avenue, Ross 1049, Baltimore, MD 21205, USA
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="C45p22_5.5"
		     /isolation_source="plasma; pediatric patient C45, 22
		     months of ART"
		     /db_xref="taxon:11676"
		     /clone="5.5"
		     /country="USA"
		     /note="subtype: B"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /note="PR"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAR86085.1"
		     /db_xref="GI:40455991"
		     /translation="PQITLWQRPIVTIKIEGQLREALIDTGADDTVFEDIGLPGRWTP
		     KMIGGIGGFVKVKQYDQVLVEICGHKAIGTVLVGPTPANIIGRNLLTQIGCTLNF"
BASE COUNT	105 a	  48 c	   69 g     75 t
ORIGIN
       1 cctcaaatca ctctttggca acgacccatc gtcacaataa agatagaggg gcaactaagg 
      61 gaagctctaa tagatacagg agcagatgat acagtgtttg aagacatagg gttgccagga 
     121 agatggacac caaaaatgat agggggaatt ggaggttttg tcaaagtaaa acaatatgat 
     181 caagtacttg tagaaatttg tggacataaa gctataggta cagtattagt aggacctaca 
     241 cctgccaaca taattggacg aaatctgttg actcagattg gttgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022


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