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LOCUS AY423941 825 bp DNA linear VRL 14-JUN-2007
DEFINITION HIV-1 isolate 55M1.1 from Zambia envelope glycoprotein (env) gene,
partial cds
ACCESSION AY423941
VERSION AY423941.1 GI:38046885
KEYWORDS .
SOURCE Human immunodeficiency virus 1 (HIV-1)
ORGANISM Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
group
REFERENCE 1 (bases 1 to 825)
Show all sequences for reference 1
AUTHORS Derdeyn,C.A., Decker,J.M., Bibollet-Ruche,F., Mokili,J.L.,
Muldoon,M., Denham,S.A., Heil,M.L., Kasolo,F., Musonda,R.,
Hahn,B.H., Shaw,G.M., Korber,B.T., Allen,S. and Hunter,E.
TITLE Envelope-Constrained Neutralization-Sensitive HIV-1 After
Heterosexual Transmission
JOURNAL Science 303 (5666), 2019-2022 (2004)
PUBMED 15044802
REFERENCE 2 (bases 1 to 825)
Show all sequences for reference 2
AUTHORS Derdeyn,C.A., Decker,J.M., Bibollet-Ruche,F., Mokili,J.L.,
Muldow,M., Denham,S.A., Heil,M.L., Lee,J.Y., Kasolo,F.,
Musonda,R.H., Hahn,B.H., Shaw,G.M., Korber,B.K., Allen,S. and
Hunter,E.
TITLE Direct Submission
JOURNAL Submitted (30-SEP-2003) Department of Microbiology, University of
Alabama at Birmingham, 845 19th Street S., BBRB 467, Birmingham, AL
35294, USA
COMMENT Patients were enrolled in this study between August, 1994 and
November 1998.
FEATURES Location/Qualifiers
source 1..825
/organism="Human immunodeficiency virus 1"
/proviral="Human immunodeficiency virus 1"
/mol_type="genomic DNA"
/isolate="55M1.1"
/isolation_source="isolated from male on 13-Aug-98;
peripheral blood mononuclear cells"
/db_xref="taxon:11676"
/country="Zambia: Lusaka"
/note="subtype: C; group: M"
gene <1..>825
/gene="env"
CDS <1..>825
/gene="env"
/codon_start="1"
/transl_table="1"
/product="envelope glycoprotein"
/protein_id="AAR09351.1"
/db_xref="GI:38046886"
/translation="NCTFIKNTTEIKNCTFNMTTELRDKKQTGRALFDTLDIVPLDNS
SDSNSNYSEYRLISCNTSTITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFNRLGPC
NNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVNIVCT
RPNNNTRKSMRIGPGQTFYATGDIIGNIRQAHCNISGKEWNTTLTRVKERLKKHFPNK
NITFEPSSGGDLEITTHSFNCRGEFFYCNTSNLFNETFINETLRNQTNVNKTITLQC"
BASE COUNT 344 a 138 c 133 g 210 t
ORIGIN
1 aactgtacgt ttataaaaaa taccacagaa ataaaaaatt gtaccttcaa tatgaccaca
61 gaactaagag ataaaaaaca gacaggaagg gcactttttg atacacttga tatagtacca
121 cttgataaca gtagcgactc taatagcaac tatagtgagt atagattaat aagttgtaat
181 acctcaacca taacacaagc ctgtccaaag gtctcttttg acccaattcc tatacattat
241 tgtgctccag ctggttatgc gattctaaag tgtaataata agacattcaa tagattagga
301 ccatgtaata atgtcagcac agtacaatgt acacatggta ttaagccagt ggtatcaact
361 caattactgt taaatggtag cctagcagaa gaagagataa taattagatc tgaaaatctg
421 acaaacaatg ccaaaacaat aatagtacat cttaataaat ctgtaaatat tgtgtgtaca
481 agacccaaca ataatacaag gaaaagtatg aggataggac caggacaaac attctatgca
541 acaggagaca taataggaaa tataagacaa gcacattgta acattagtgg aaaagaatgg
601 aatacaactt taacaagagt aaaggaaaga ttaaaaaagc acttccctaa taaaaacata
661 acatttgaac catcctcagg aggggaccta gaaattacaa cacatagctt taattgtaga
721 ggagaatttt tctattgcaa tacatcaaac ttgtttaatg agacgtttat taatgagacg
781 ttaaggaatc aaaccaatgt aaataaaacc atcacactcc aatgc
//
last modified: Tue May 31 10:56 2022