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LOCUS	    AY423941		     825 bp    DNA     linear	VRL 14-JUN-2007
DEFINITION  HIV-1 isolate 55M1.1 from Zambia envelope glycoprotein (env) gene,
	    partial cds
ACCESSION   AY423941
VERSION     AY423941.1 GI:38046885
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 825)
            Show all sequences for reference 1
  AUTHORS   Derdeyn,C.A., Decker,J.M., Bibollet-Ruche,F., Mokili,J.L.,
	    Muldoon,M., Denham,S.A., Heil,M.L., Kasolo,F., Musonda,R.,
	    Hahn,B.H., Shaw,G.M., Korber,B.T., Allen,S. and Hunter,E.
  TITLE     Envelope-Constrained Neutralization-Sensitive HIV-1 After
	    Heterosexual Transmission
  JOURNAL   Science 303 (5666), 2019-2022 (2004)
  PUBMED    15044802
REFERENCE   2 (bases 1 to 825)
            Show all sequences for reference 2
  AUTHORS   Derdeyn,C.A., Decker,J.M., Bibollet-Ruche,F., Mokili,J.L.,
	    Muldow,M., Denham,S.A., Heil,M.L., Lee,J.Y., Kasolo,F.,
	    Musonda,R.H., Hahn,B.H., Shaw,G.M., Korber,B.K., Allen,S. and
	    Hunter,E.
  TITLE     Direct Submission
  JOURNAL   Submitted (30-SEP-2003) Department of Microbiology, University of
	    Alabama at Birmingham, 845 19th Street S., BBRB 467, Birmingham, AL
	    35294, USA
COMMENT     Patients were enrolled in this study between August, 1994 and
	    November 1998.
FEATURES             Location/Qualifiers
     source	     1..825
		     /organism="Human immunodeficiency virus 1"
		     /proviral="Human immunodeficiency virus 1"
		     /mol_type="genomic DNA"
		     /isolate="55M1.1"
		     /isolation_source="isolated from male on 13-Aug-98;
		     peripheral blood mononuclear cells"
		     /db_xref="taxon:11676"
		     /country="Zambia: Lusaka"
		     /note="subtype: C; group: M"
     gene	     <1..>825
		     /gene="env"
     CDS	     <1..>825
		     /gene="env"
		     /codon_start="1"
		     /transl_table="1"
		     /product="envelope glycoprotein"
		     /protein_id="AAR09351.1"
		     /db_xref="GI:38046886"
		     /translation="NCTFIKNTTEIKNCTFNMTTELRDKKQTGRALFDTLDIVPLDNS
		     SDSNSNYSEYRLISCNTSTITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFNRLGPC
		     NNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVNIVCT
		     RPNNNTRKSMRIGPGQTFYATGDIIGNIRQAHCNISGKEWNTTLTRVKERLKKHFPNK
		     NITFEPSSGGDLEITTHSFNCRGEFFYCNTSNLFNETFINETLRNQTNVNKTITLQC"
BASE COUNT	344 a	 138 c	  133 g    210 t
ORIGIN
       1 aactgtacgt ttataaaaaa taccacagaa ataaaaaatt gtaccttcaa tatgaccaca 
      61 gaactaagag ataaaaaaca gacaggaagg gcactttttg atacacttga tatagtacca 
     121 cttgataaca gtagcgactc taatagcaac tatagtgagt atagattaat aagttgtaat 
     181 acctcaacca taacacaagc ctgtccaaag gtctcttttg acccaattcc tatacattat 
     241 tgtgctccag ctggttatgc gattctaaag tgtaataata agacattcaa tagattagga 
     301 ccatgtaata atgtcagcac agtacaatgt acacatggta ttaagccagt ggtatcaact 
     361 caattactgt taaatggtag cctagcagaa gaagagataa taattagatc tgaaaatctg 
     421 acaaacaatg ccaaaacaat aatagtacat cttaataaat ctgtaaatat tgtgtgtaca 
     481 agacccaaca ataatacaag gaaaagtatg aggataggac caggacaaac attctatgca 
     541 acaggagaca taataggaaa tataagacaa gcacattgta acattagtgg aaaagaatgg 
     601 aatacaactt taacaagagt aaaggaaaga ttaaaaaagc acttccctaa taaaaacata 
     661 acatttgaac catcctcagg aggggaccta gaaattacaa cacatagctt taattgtaga 
     721 ggagaatttt tctattgcaa tacatcaaac ttgtttaatg agacgtttat taatgagacg 
     781 ttaaggaatc aaaccaatgt aaataaaacc atcacactcc aatgc
//
last modified: Tue May 31 10:56 2022


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