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LOCUS	    AY390088		     297 bp    RNA     linear	VRL 25-MAR-2004
DEFINITION  HIV-1 isolate 245 from Brazil protease (pol) gene, partial cds
ACCESSION   AY390088
VERSION     AY390088.1 GI:43339962
KEYWORDS    .
SOURCE	    Human immunodeficiency virus 1 (HIV-1)
  ORGANISM  Human immunodeficiency virus 1 Viruses; Retro-transcribing viruses;
	    Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus
	    group
REFERENCE   1 (bases 1 to 297)
            Show all sequences for reference 1
  AUTHORS   Dumans,A.T., Soares,M.A., Machado,E.S., Hue,S., Brindeiro,R.M.,
	    Pillay,D. and Tanuri,A.
  TITLE     Synonymous genetic polymorphisms within Brazilian human
	    immunodeficiency virus Type 1 subtypes may influence mutational
	    routes to drug resistance
  JOURNAL   J. Infect. Dis. 189 (7), 1232-1238 (2004)
  PUBMED    15031792
REFERENCE   2 (bases 1 to 297)
            Show all sequences for reference 2
  AUTHORS   Dumans,A.T., Soares,M.A., Machado,E.S., Hue,S., Brindeiro,R.M.,
	    Pillay,D. and Tanuri,A.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-SEP-2003) Genetica, Universidade Federal Do Rio De
	    Janeiro, Ccs - Bloco a - Sala A2-121 - Cidade Universitaria - Ilha
	    Do Fundao, Rio De Janeiro, RJ 21949-970, Brazil
FEATURES             Location/Qualifiers
     source	     1..297
		     /organism="Human immunodeficiency virus 1"
		     /mol_type="genomic RNA"
		     /isolate="245"
		     /db_xref="taxon:11676"
		     /country="Brazil"
     gene	     <1..>297
		     /gene="pol"
     CDS	     <1..>297
		     /gene="pol"
		     /codon_start="1"
		     /transl_table="1"
		     /product="protease"
		     /protein_id="AAS46408.1"
		     /db_xref="GI:43339963"
		     /translation="PQITLWQRPLVTIKVGGQLKEALLDTGADDTVLEDIALPGKWKP
		     QMIGGIGGFIKVKQYENILIEICGHKAIGTVLIGPTPVNIIGRNLLTQIGCTLNF"
BASE COUNT	105 a	  49 c	   69 g     74 t
ORIGIN
       1 cctcaaatca ctctttggca acgaccccta gtcacaataa aagtaggggg gcagctaaag 
      61 gaagctctgt tagatacagg agcagatgat acagtattag aagacatagc tttgccagga 
     121 aaatggaaac cacaaatgat agggggaatt ggaggtttta tcaaagtaaa acagtatgag 
     181 aacatactca tagaaatttg tggacacaag gctataggta cagtgttgat aggacctacg 
     241 cctgtcaaca taattggaag aaatttgttg actcagattg gctgcacttt aaatttt
//
last modified: Tue May 31 10:56 2022


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